Protein–RNA interactions for Protein: Q96EY7

PTCD3, Pentatricopeptide repeat domain-containing protein 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 689 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3Q96EY7 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
PTCD3Q96EY7 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
PTCD3Q96EY7 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PTCD3Q96EY7 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PTCD3Q96EY7 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
PTCD3Q96EY7 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC22.59■■□□□ 1.21
PTCD3Q96EY7 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PTCD3Q96EY7 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PTCD3Q96EY7 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PTCD3Q96EY7 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC22.58■■□□□ 1.21
PTCD3Q96EY7 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
PTCD3Q96EY7 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
PTCD3Q96EY7 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
PTCD3Q96EY7 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC22.58■■□□□ 1.2
PTCD3Q96EY7 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PTCD3Q96EY7 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PTCD3Q96EY7 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PTCD3Q96EY7 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC22.57■■□□□ 1.2
PTCD3Q96EY7 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PTCD3Q96EY7 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC22.57■■□□□ 1.2
PTCD3Q96EY7 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC22.57■■□□□ 1.2
PTCD3Q96EY7 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PTCD3Q96EY7 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PTCD3Q96EY7 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PTCD3Q96EY7 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PTCD3Q96EY7 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC22.56■■□□□ 1.2
PTCD3Q96EY7 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PTCD3Q96EY7 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
PTCD3Q96EY7 TSPY13P-201ENST00000338964 914 ntBASIC22.56■■□□□ 1.2
PTCD3Q96EY7 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PTCD3Q96EY7 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC22.56■■□□□ 1.2
PTCD3Q96EY7 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PTCD3Q96EY7 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC22.55■■□□□ 1.2
PTCD3Q96EY7 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PTCD3Q96EY7 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PTCD3Q96EY7 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PTCD3Q96EY7 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC22.55■■□□□ 1.2
PTCD3Q96EY7 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PTCD3Q96EY7 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC22.55■■□□□ 1.2
PTCD3Q96EY7 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
PTCD3Q96EY7 AC019171.1-201ENST00000601251 1056 ntBASIC22.55■■□□□ 1.2
PTCD3Q96EY7 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PTCD3Q96EY7 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
PTCD3Q96EY7 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PTCD3Q96EY7 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PTCD3Q96EY7 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC22.55■■□□□ 1.2
PTCD3Q96EY7 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC22.54■■□□□ 1.2
PTCD3Q96EY7 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PTCD3Q96EY7 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
PTCD3Q96EY7 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
PTCD3Q96EY7 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC22.54■■□□□ 1.2
PTCD3Q96EY7 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PTCD3Q96EY7 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PTCD3Q96EY7 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC22.54■■□□□ 1.2
PTCD3Q96EY7 MTX2-204ENST00000443241 799 ntTSL 3 BASIC22.54■■□□□ 1.2
PTCD3Q96EY7 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC22.54■■□□□ 1.2
PTCD3Q96EY7 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
PTCD3Q96EY7 AC012354.3-201ENST00000623734 483 ntBASIC22.54■■□□□ 1.2
PTCD3Q96EY7 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PTCD3Q96EY7 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PTCD3Q96EY7 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PTCD3Q96EY7 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC22.54■■□□□ 1.2
PTCD3Q96EY7 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PTCD3Q96EY7 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PTCD3Q96EY7 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PTCD3Q96EY7 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PTCD3Q96EY7 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC22.53■■□□□ 1.2
PTCD3Q96EY7 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PTCD3Q96EY7 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PTCD3Q96EY7 SSSCA1-AS1-201ENST00000567594 614 ntBASIC22.53■■□□□ 1.2
PTCD3Q96EY7 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
PTCD3Q96EY7 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
PTCD3Q96EY7 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
PTCD3Q96EY7 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
PTCD3Q96EY7 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC22.52■■□□□ 1.2
PTCD3Q96EY7 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PTCD3Q96EY7 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC22.52■■□□□ 1.2
PTCD3Q96EY7 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PTCD3Q96EY7 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC22.52■■□□□ 1.2
PTCD3Q96EY7 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PTCD3Q96EY7 BHLHE23-202ENST00000612929 1109 ntBASIC22.52■■□□□ 1.2
PTCD3Q96EY7 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PTCD3Q96EY7 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PTCD3Q96EY7 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PTCD3Q96EY7 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PTCD3Q96EY7 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.19
PTCD3Q96EY7 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
PTCD3Q96EY7 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
PTCD3Q96EY7 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
PTCD3Q96EY7 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
PTCD3Q96EY7 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PTCD3Q96EY7 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC22.51■■□□□ 1.19
PTCD3Q96EY7 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PTCD3Q96EY7 AC074183.2-201ENST00000623112 922 ntBASIC22.51■■□□□ 1.19
PTCD3Q96EY7 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC22.51■■□□□ 1.19
PTCD3Q96EY7 LINC00526-201ENST00000581067 1875 ntBASIC22.51■■□□□ 1.19
PTCD3Q96EY7 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PTCD3Q96EY7 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PTCD3Q96EY7 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PTCD3Q96EY7 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms