Protein–RNA interactions for Protein: Q96DA2

RAB39B, Ras-related protein Rab-39B, humanhuman

Predictions only

Length 213 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39BQ96DA2 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB39BQ96DA2 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB39BQ96DA2 AC022211.4-201ENST00000625094 2161 ntBASIC19.39■□□□□ 0.69
RAB39BQ96DA2 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
RAB39BQ96DA2 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAB39BQ96DA2 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.38■□□□□ 0.69
RAB39BQ96DA2 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAB39BQ96DA2 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RAB39BQ96DA2 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.38■□□□□ 0.69
RAB39BQ96DA2 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.38■□□□□ 0.69
RAB39BQ96DA2 AP003733.4-201ENST00000623785 1697 ntBASIC19.38■□□□□ 0.69
RAB39BQ96DA2 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAB39BQ96DA2 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB39BQ96DA2 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB39BQ96DA2 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RAB39BQ96DA2 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.37■□□□□ 0.69
RAB39BQ96DA2 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.37■□□□□ 0.69
RAB39BQ96DA2 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
RAB39BQ96DA2 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB39BQ96DA2 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.37■□□□□ 0.69
RAB39BQ96DA2 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.37■□□□□ 0.69
RAB39BQ96DA2 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.37■□□□□ 0.69
RAB39BQ96DA2 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.37■□□□□ 0.69
RAB39BQ96DA2 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB39BQ96DA2 AL117332.1-201ENST00000622628 974 ntBASIC19.37■□□□□ 0.69
RAB39BQ96DA2 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB39BQ96DA2 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB39BQ96DA2 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB39BQ96DA2 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB39BQ96DA2 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB39BQ96DA2 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
RAB39BQ96DA2 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.36■□□□□ 0.69
RAB39BQ96DA2 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.36■□□□□ 0.69
RAB39BQ96DA2 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.36■□□□□ 0.69
RAB39BQ96DA2 SLC6A10P-202ENST00000431994 2058 ntBASIC19.36■□□□□ 0.69
RAB39BQ96DA2 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB39BQ96DA2 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB39BQ96DA2 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC19.36■□□□□ 0.69
RAB39BQ96DA2 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB39BQ96DA2 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
RAB39BQ96DA2 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.36■□□□□ 0.69
RAB39BQ96DA2 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.36■□□□□ 0.69
RAB39BQ96DA2 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.36■□□□□ 0.69
RAB39BQ96DA2 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.36■□□□□ 0.69
RAB39BQ96DA2 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
RAB39BQ96DA2 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB39BQ96DA2 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB39BQ96DA2 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB39BQ96DA2 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RAB39BQ96DA2 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RAB39BQ96DA2 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAB39BQ96DA2 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RAB39BQ96DA2 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RAB39BQ96DA2 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAB39BQ96DA2 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.35■□□□□ 0.69
RAB39BQ96DA2 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAB39BQ96DA2 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RAB39BQ96DA2 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.35■□□□□ 0.69
RAB39BQ96DA2 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.35■□□□□ 0.69
RAB39BQ96DA2 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
RAB39BQ96DA2 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.35■□□□□ 0.69
RAB39BQ96DA2 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAB39BQ96DA2 AC079834.2-201ENST00000609776 1949 ntBASIC19.35■□□□□ 0.69
RAB39BQ96DA2 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RAB39BQ96DA2 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
RAB39BQ96DA2 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
RAB39BQ96DA2 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAB39BQ96DA2 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAB39BQ96DA2 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAB39BQ96DA2 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.34■□□□□ 0.69
RAB39BQ96DA2 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.34■□□□□ 0.69
RAB39BQ96DA2 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.34■□□□□ 0.69
RAB39BQ96DA2 MIR3621-201ENST00000580529 85 ntBASIC19.34■□□□□ 0.69
RAB39BQ96DA2 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
RAB39BQ96DA2 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC19.34■□□□□ 0.69
RAB39BQ96DA2 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RAB39BQ96DA2 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RAB39BQ96DA2 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.33■□□□□ 0.69
RAB39BQ96DA2 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RAB39BQ96DA2 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.33■□□□□ 0.69
RAB39BQ96DA2 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
RAB39BQ96DA2 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
RAB39BQ96DA2 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.33■□□□□ 0.68
RAB39BQ96DA2 SNX5-217ENST00000606557 1087 ntBASIC19.33■□□□□ 0.68
RAB39BQ96DA2 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
RAB39BQ96DA2 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RAB39BQ96DA2 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
RAB39BQ96DA2 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RAB39BQ96DA2 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RAB39BQ96DA2 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB39BQ96DA2 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB39BQ96DA2 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB39BQ96DA2 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB39BQ96DA2 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB39BQ96DA2 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB39BQ96DA2 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.32■□□□□ 0.68
RAB39BQ96DA2 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB39BQ96DA2 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RAB39BQ96DA2 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.32■□□□□ 0.68
RAB39BQ96DA2 MIR6722-201ENST00000617286 78 ntBASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms