Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
FOXRED1Q96CU9 AL592295.1-201ENST00000400984 884 ntBASIC19.72■□□□□ 0.75
FOXRED1Q96CU9 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
FOXRED1Q96CU9 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
FOXRED1Q96CU9 RPS2P7-201ENST00000447334 885 ntBASIC19.72■□□□□ 0.75
FOXRED1Q96CU9 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
FOXRED1Q96CU9 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.72■□□□□ 0.75
FOXRED1Q96CU9 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.72■□□□□ 0.75
FOXRED1Q96CU9 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
FOXRED1Q96CU9 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
FOXRED1Q96CU9 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
FOXRED1Q96CU9 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
FOXRED1Q96CU9 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
FOXRED1Q96CU9 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
FOXRED1Q96CU9 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
FOXRED1Q96CU9 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
FOXRED1Q96CU9 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
FOXRED1Q96CU9 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC19.71■□□□□ 0.75
FOXRED1Q96CU9 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC19.71■□□□□ 0.75
FOXRED1Q96CU9 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
FOXRED1Q96CU9 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
FOXRED1Q96CU9 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
FOXRED1Q96CU9 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
FOXRED1Q96CU9 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
FOXRED1Q96CU9 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
FOXRED1Q96CU9 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
FOXRED1Q96CU9 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
FOXRED1Q96CU9 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
FOXRED1Q96CU9 AC233723.2-201ENST00000623798 2106 ntBASIC19.7■□□□□ 0.74
FOXRED1Q96CU9 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
FOXRED1Q96CU9 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
FOXRED1Q96CU9 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
FOXRED1Q96CU9 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
FOXRED1Q96CU9 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
FOXRED1Q96CU9 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
FOXRED1Q96CU9 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
FOXRED1Q96CU9 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC19.7■□□□□ 0.74
FOXRED1Q96CU9 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
FOXRED1Q96CU9 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
FOXRED1Q96CU9 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
FOXRED1Q96CU9 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
FOXRED1Q96CU9 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
FOXRED1Q96CU9 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
FOXRED1Q96CU9 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
FOXRED1Q96CU9 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
FOXRED1Q96CU9 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
FOXRED1Q96CU9 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
FOXRED1Q96CU9 AC012354.3-201ENST00000623734 483 ntBASIC19.69■□□□□ 0.74
FOXRED1Q96CU9 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
FOXRED1Q96CU9 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
FOXRED1Q96CU9 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
FOXRED1Q96CU9 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
FOXRED1Q96CU9 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
FOXRED1Q96CU9 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
FOXRED1Q96CU9 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
FOXRED1Q96CU9 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.68■□□□□ 0.74
FOXRED1Q96CU9 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.68■□□□□ 0.74
FOXRED1Q96CU9 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
FOXRED1Q96CU9 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.68■□□□□ 0.74
FOXRED1Q96CU9 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
FOXRED1Q96CU9 AC018755.3-202ENST00000596210 929 ntBASIC19.68■□□□□ 0.74
FOXRED1Q96CU9 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
FOXRED1Q96CU9 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
FOXRED1Q96CU9 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
FOXRED1Q96CU9 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
FOXRED1Q96CU9 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
FOXRED1Q96CU9 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
FOXRED1Q96CU9 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
FOXRED1Q96CU9 KRT18P60-201ENST00000312876 1297 ntBASIC19.67■□□□□ 0.74
FOXRED1Q96CU9 AL592293.1-201ENST00000502889 1188 ntBASIC19.67■□□□□ 0.74
FOXRED1Q96CU9 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
FOXRED1Q96CU9 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
FOXRED1Q96CU9 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
FOXRED1Q96CU9 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.67■□□□□ 0.74
FOXRED1Q96CU9 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
FOXRED1Q96CU9 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
FOXRED1Q96CU9 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
FOXRED1Q96CU9 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
FOXRED1Q96CU9 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
FOXRED1Q96CU9 AL022069.1-201ENST00000568025 1636 ntBASIC19.66■□□□□ 0.74
FOXRED1Q96CU9 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
FOXRED1Q96CU9 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
FOXRED1Q96CU9 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
FOXRED1Q96CU9 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
FOXRED1Q96CU9 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
FOXRED1Q96CU9 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
FOXRED1Q96CU9 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
FOXRED1Q96CU9 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
FOXRED1Q96CU9 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.65■□□□□ 0.74
FOXRED1Q96CU9 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
FOXRED1Q96CU9 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
FOXRED1Q96CU9 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
FOXRED1Q96CU9 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC19.65■□□□□ 0.74
FOXRED1Q96CU9 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
FOXRED1Q96CU9 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
FOXRED1Q96CU9 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
FOXRED1Q96CU9 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
FOXRED1Q96CU9 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
FOXRED1Q96CU9 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
FOXRED1Q96CU9 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms