Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 AC009086.3-201ENST00000623486 1008 ntBASIC30.19■■■□□ 2.42
RAPGEF4Q8WZA2 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
RAPGEF4Q8WZA2 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
RAPGEF4Q8WZA2 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
RAPGEF4Q8WZA2 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
RAPGEF4Q8WZA2 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC30.18■■■□□ 2.42
RAPGEF4Q8WZA2 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC30.18■■■□□ 2.42
RAPGEF4Q8WZA2 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
RAPGEF4Q8WZA2 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
RAPGEF4Q8WZA2 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC30.18■■■□□ 2.42
RAPGEF4Q8WZA2 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC30.18■■■□□ 2.42
RAPGEF4Q8WZA2 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC30.17■■■□□ 2.42
RAPGEF4Q8WZA2 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
RAPGEF4Q8WZA2 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
RAPGEF4Q8WZA2 MIR3181-201ENST00000578512 73 ntBASIC30.17■■■□□ 2.42
RAPGEF4Q8WZA2 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC30.17■■■□□ 2.42
RAPGEF4Q8WZA2 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC30.17■■■□□ 2.42
RAPGEF4Q8WZA2 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
RAPGEF4Q8WZA2 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
RAPGEF4Q8WZA2 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
RAPGEF4Q8WZA2 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC30.16■■■□□ 2.42
RAPGEF4Q8WZA2 RHOF-204ENST00000537265 699 ntTSL 2 BASIC30.16■■■□□ 2.42
RAPGEF4Q8WZA2 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC30.16■■■□□ 2.42
RAPGEF4Q8WZA2 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC30.16■■■□□ 2.42
RAPGEF4Q8WZA2 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
RAPGEF4Q8WZA2 AL162430.1-201ENST00000480705 870 ntBASIC30.15■■■□□ 2.42
RAPGEF4Q8WZA2 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC30.15■■■□□ 2.42
RAPGEF4Q8WZA2 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC30.15■■■□□ 2.42
RAPGEF4Q8WZA2 AC233992.3-201ENST00000607491 485 ntBASIC30.15■■■□□ 2.42
RAPGEF4Q8WZA2 CD37-213ENST00000598095 1598 ntTSL 2 BASIC30.15■■■□□ 2.42
RAPGEF4Q8WZA2 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC30.14■■■□□ 2.42
RAPGEF4Q8WZA2 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC30.14■■■□□ 2.42
RAPGEF4Q8WZA2 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
RAPGEF4Q8WZA2 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
RAPGEF4Q8WZA2 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC30.14■■■□□ 2.42
RAPGEF4Q8WZA2 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC30.14■■■□□ 2.42
RAPGEF4Q8WZA2 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
RAPGEF4Q8WZA2 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
RAPGEF4Q8WZA2 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
RAPGEF4Q8WZA2 AC091060.1-201ENST00000623524 1766 ntBASIC30.13■■■□□ 2.41
RAPGEF4Q8WZA2 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC30.13■■■□□ 2.41
RAPGEF4Q8WZA2 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC30.13■■■□□ 2.41
RAPGEF4Q8WZA2 BX842568.3-201ENST00000418104 571 ntBASIC30.13■■■□□ 2.41
RAPGEF4Q8WZA2 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC30.13■■■□□ 2.41
RAPGEF4Q8WZA2 NKILA-201ENST00000613231 537 ntTSL 4 BASIC30.13■■■□□ 2.41
RAPGEF4Q8WZA2 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
RAPGEF4Q8WZA2 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC30.12■■■□□ 2.41
RAPGEF4Q8WZA2 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC30.12■■■□□ 2.41
RAPGEF4Q8WZA2 AC145676.1-201ENST00000514988 2004 ntBASIC30.12■■■□□ 2.41
RAPGEF4Q8WZA2 VGF-203ENST00000611537 1622 ntTSL 5 BASIC30.12■■■□□ 2.41
RAPGEF4Q8WZA2 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
RAPGEF4Q8WZA2 JTB-203ENST00000368589 1216 ntTSL 2 BASIC30.12■■■□□ 2.41
RAPGEF4Q8WZA2 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC30.12■■■□□ 2.41
RAPGEF4Q8WZA2 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC30.12■■■□□ 2.41
RAPGEF4Q8WZA2 MPST-208ENST00000628507 698 ntTSL 5 BASIC30.12■■■□□ 2.41
RAPGEF4Q8WZA2 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
RAPGEF4Q8WZA2 AL161729.1-201ENST00000604104 1402 ntBASIC30.12■■■□□ 2.41
RAPGEF4Q8WZA2 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC30.12■■■□□ 2.41
RAPGEF4Q8WZA2 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC30.11■■■□□ 2.41
RAPGEF4Q8WZA2 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC30.11■■■□□ 2.41
RAPGEF4Q8WZA2 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC30.11■■■□□ 2.41
RAPGEF4Q8WZA2 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC30.11■■■□□ 2.41
RAPGEF4Q8WZA2 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC30.11■■■□□ 2.41
RAPGEF4Q8WZA2 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC30.11■■■□□ 2.41
RAPGEF4Q8WZA2 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
RAPGEF4Q8WZA2 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC30.1■■■□□ 2.41
RAPGEF4Q8WZA2 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC30.1■■■□□ 2.41
RAPGEF4Q8WZA2 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC30.1■■■□□ 2.41
RAPGEF4Q8WZA2 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
RAPGEF4Q8WZA2 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC30.1■■■□□ 2.41
RAPGEF4Q8WZA2 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
RAPGEF4Q8WZA2 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
RAPGEF4Q8WZA2 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC30.1■■■□□ 2.41
RAPGEF4Q8WZA2 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
RAPGEF4Q8WZA2 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
RAPGEF4Q8WZA2 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
RAPGEF4Q8WZA2 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
RAPGEF4Q8WZA2 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC30.09■■■□□ 2.41
RAPGEF4Q8WZA2 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
RAPGEF4Q8WZA2 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
RAPGEF4Q8WZA2 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
RAPGEF4Q8WZA2 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC30.08■■■□□ 2.41
RAPGEF4Q8WZA2 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC30.08■■■□□ 2.41
RAPGEF4Q8WZA2 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC30.08■■■□□ 2.41
RAPGEF4Q8WZA2 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
RAPGEF4Q8WZA2 USF2-207ENST00000595068 1612 ntTSL 5 BASIC30.08■■■□□ 2.41
RAPGEF4Q8WZA2 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
RAPGEF4Q8WZA2 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC30.08■■■□□ 2.41
RAPGEF4Q8WZA2 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
RAPGEF4Q8WZA2 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC30.08■■■□□ 2.41
RAPGEF4Q8WZA2 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
RAPGEF4Q8WZA2 GRAMD4P2-201ENST00000423297 1097 ntBASIC30.07■■■□□ 2.4
RAPGEF4Q8WZA2 GLI3-203ENST00000437480 451 ntTSL 2 BASIC30.07■■■□□ 2.4
RAPGEF4Q8WZA2 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
RAPGEF4Q8WZA2 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC30.07■■■□□ 2.4
RAPGEF4Q8WZA2 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
RAPGEF4Q8WZA2 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC30.07■■■□□ 2.4
RAPGEF4Q8WZA2 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
RAPGEF4Q8WZA2 HLA-L-211ENST00000482052 1765 ntBASIC30.06■■■□□ 2.4
RAPGEF4Q8WZA2 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC30.06■■■□□ 2.4
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms