Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PTCD2Q8WV60 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC23.05■■□□□ 1.28
PTCD2Q8WV60 EI24-213ENST00000618552 1747 ntTSL 5 BASIC23.05■■□□□ 1.28
PTCD2Q8WV60 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PTCD2Q8WV60 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PTCD2Q8WV60 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
PTCD2Q8WV60 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PTCD2Q8WV60 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PTCD2Q8WV60 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC23.05■■□□□ 1.28
PTCD2Q8WV60 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PTCD2Q8WV60 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC23.05■■□□□ 1.28
PTCD2Q8WV60 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC23.05■■□□□ 1.28
PTCD2Q8WV60 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC23.05■■□□□ 1.28
PTCD2Q8WV60 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
PTCD2Q8WV60 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
PTCD2Q8WV60 LBH-205ENST00000407930 756 ntTSL 2 BASIC23.04■■□□□ 1.28
PTCD2Q8WV60 TSPY9P-201ENST00000440215 945 ntBASIC23.04■■□□□ 1.28
PTCD2Q8WV60 TSPY11P-201ENST00000442607 1045 ntBASIC23.04■■□□□ 1.28
PTCD2Q8WV60 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PTCD2Q8WV60 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC23.04■■□□□ 1.28
PTCD2Q8WV60 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC23.04■■□□□ 1.28
PTCD2Q8WV60 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC23.04■■□□□ 1.28
PTCD2Q8WV60 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC23.04■■□□□ 1.28
PTCD2Q8WV60 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PTCD2Q8WV60 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
PTCD2Q8WV60 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PTCD2Q8WV60 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PTCD2Q8WV60 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PTCD2Q8WV60 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PTCD2Q8WV60 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PTCD2Q8WV60 LTK-203ENST00000453182 2412 ntTSL 2 BASIC23.02■■□□□ 1.28
PTCD2Q8WV60 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PTCD2Q8WV60 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PTCD2Q8WV60 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PTCD2Q8WV60 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC23.02■■□□□ 1.28
PTCD2Q8WV60 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PTCD2Q8WV60 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PTCD2Q8WV60 DUSP8P5-201ENST00000422884 1815 ntBASIC23.02■■□□□ 1.28
PTCD2Q8WV60 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
PTCD2Q8WV60 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PTCD2Q8WV60 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC23.01■■□□□ 1.27
PTCD2Q8WV60 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
PTCD2Q8WV60 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC23.01■■□□□ 1.27
PTCD2Q8WV60 GRAMD4P7-201ENST00000578182 1232 ntBASIC23.01■■□□□ 1.27
PTCD2Q8WV60 AC092028.1-203ENST00000608262 953 ntBASIC23.01■■□□□ 1.27
PTCD2Q8WV60 AC131212.1-201ENST00000613771 668 ntBASIC23.01■■□□□ 1.27
PTCD2Q8WV60 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC23.01■■□□□ 1.27
PTCD2Q8WV60 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
PTCD2Q8WV60 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PTCD2Q8WV60 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC23■■□□□ 1.27
PTCD2Q8WV60 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC23■■□□□ 1.27
PTCD2Q8WV60 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC23■■□□□ 1.27
PTCD2Q8WV60 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PTCD2Q8WV60 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC23■■□□□ 1.27
PTCD2Q8WV60 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PTCD2Q8WV60 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC22.99■■□□□ 1.27
PTCD2Q8WV60 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
PTCD2Q8WV60 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC22.99■■□□□ 1.27
PTCD2Q8WV60 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC22.99■■□□□ 1.27
PTCD2Q8WV60 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
PTCD2Q8WV60 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PTCD2Q8WV60 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
PTCD2Q8WV60 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC22.98■■□□□ 1.27
PTCD2Q8WV60 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PTCD2Q8WV60 ALDH1A3-203ENST00000557963 1670 ntBASIC22.98■■□□□ 1.27
PTCD2Q8WV60 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC22.98■■□□□ 1.27
PTCD2Q8WV60 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC22.98■■□□□ 1.27
PTCD2Q8WV60 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC22.98■■□□□ 1.27
PTCD2Q8WV60 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC22.98■■□□□ 1.27
PTCD2Q8WV60 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC22.98■■□□□ 1.27
PTCD2Q8WV60 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PTCD2Q8WV60 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PTCD2Q8WV60 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
PTCD2Q8WV60 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC22.97■■□□□ 1.27
PTCD2Q8WV60 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
PTCD2Q8WV60 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
PTCD2Q8WV60 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC22.97■■□□□ 1.27
PTCD2Q8WV60 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC22.97■■□□□ 1.27
PTCD2Q8WV60 TK2-202ENST00000417693 1046 ntTSL 2 BASIC22.97■■□□□ 1.27
PTCD2Q8WV60 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
PTCD2Q8WV60 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
PTCD2Q8WV60 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
PTCD2Q8WV60 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC22.97■■□□□ 1.27
PTCD2Q8WV60 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
PTCD2Q8WV60 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC22.97■■□□□ 1.27
PTCD2Q8WV60 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
PTCD2Q8WV60 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PTCD2Q8WV60 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC22.96■■□□□ 1.27
PTCD2Q8WV60 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
PTCD2Q8WV60 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC22.96■■□□□ 1.27
PTCD2Q8WV60 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
PTCD2Q8WV60 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
PTCD2Q8WV60 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
PTCD2Q8WV60 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC22.96■■□□□ 1.27
PTCD2Q8WV60 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
PTCD2Q8WV60 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
PTCD2Q8WV60 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
PTCD2Q8WV60 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PTCD2Q8WV60 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
PTCD2Q8WV60 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms