Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SMIM11BQ8TCY0 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SMIM11BQ8TCY0 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
SMIM11BQ8TCY0 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC14.79□□□□□ -0.04
SMIM11BQ8TCY0 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMIM11BQ8TCY0 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SMIM11BQ8TCY0 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC14.79□□□□□ -0.04
SMIM11BQ8TCY0 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMIM11BQ8TCY0 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
SMIM11BQ8TCY0 AC148477.6-201ENST00000623746 465 ntBASIC14.79□□□□□ -0.04
SMIM11BQ8TCY0 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SMIM11BQ8TCY0 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC14.79□□□□□ -0.04
SMIM11BQ8TCY0 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SMIM11BQ8TCY0 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
SMIM11BQ8TCY0 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SMIM11BQ8TCY0 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMIM11BQ8TCY0 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMIM11BQ8TCY0 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMIM11BQ8TCY0 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMIM11BQ8TCY0 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC14.78□□□□□ -0.04
SMIM11BQ8TCY0 AC008813.1-201ENST00000536597 885 ntBASIC14.78□□□□□ -0.04
SMIM11BQ8TCY0 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMIM11BQ8TCY0 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMIM11BQ8TCY0 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC14.78□□□□□ -0.04
SMIM11BQ8TCY0 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC14.78□□□□□ -0.04
SMIM11BQ8TCY0 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMIM11BQ8TCY0 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMIM11BQ8TCY0 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMIM11BQ8TCY0 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SMIM11BQ8TCY0 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SMIM11BQ8TCY0 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC14.77□□□□□ -0.04
SMIM11BQ8TCY0 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SMIM11BQ8TCY0 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SMIM11BQ8TCY0 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC14.77□□□□□ -0.04
SMIM11BQ8TCY0 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SMIM11BQ8TCY0 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC14.77□□□□□ -0.04
SMIM11BQ8TCY0 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SMIM11BQ8TCY0 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC14.77□□□□□ -0.05
SMIM11BQ8TCY0 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
SMIM11BQ8TCY0 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SMIM11BQ8TCY0 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SMIM11BQ8TCY0 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SMIM11BQ8TCY0 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
SMIM11BQ8TCY0 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC14.77□□□□□ -0.05
SMIM11BQ8TCY0 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SMIM11BQ8TCY0 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SMIM11BQ8TCY0 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SMIM11BQ8TCY0 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SMIM11BQ8TCY0 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SMIM11BQ8TCY0 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC14.76□□□□□ -0.05
SMIM11BQ8TCY0 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SMIM11BQ8TCY0 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC14.76□□□□□ -0.05
SMIM11BQ8TCY0 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SMIM11BQ8TCY0 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SMIM11BQ8TCY0 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SMIM11BQ8TCY0 MYB-221ENST00000527615 2381 ntTSL 5 BASIC14.76□□□□□ -0.05
SMIM11BQ8TCY0 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC14.76□□□□□ -0.05
SMIM11BQ8TCY0 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SMIM11BQ8TCY0 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SMIM11BQ8TCY0 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
SMIM11BQ8TCY0 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SMIM11BQ8TCY0 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SMIM11BQ8TCY0 AC242852.2-201ENST00000615738 1807 ntBASIC14.76□□□□□ -0.05
SMIM11BQ8TCY0 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
SMIM11BQ8TCY0 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC14.75□□□□□ -0.05
SMIM11BQ8TCY0 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC14.75□□□□□ -0.05
SMIM11BQ8TCY0 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SMIM11BQ8TCY0 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SMIM11BQ8TCY0 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SMIM11BQ8TCY0 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SMIM11BQ8TCY0 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
SMIM11BQ8TCY0 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SMIM11BQ8TCY0 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
SMIM11BQ8TCY0 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
SMIM11BQ8TCY0 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC14.74□□□□□ -0.05
SMIM11BQ8TCY0 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SMIM11BQ8TCY0 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SMIM11BQ8TCY0 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
SMIM11BQ8TCY0 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC14.74□□□□□ -0.05
SMIM11BQ8TCY0 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC14.74□□□□□ -0.05
SMIM11BQ8TCY0 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SMIM11BQ8TCY0 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SMIM11BQ8TCY0 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SMIM11BQ8TCY0 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC14.73□□□□□ -0.05
SMIM11BQ8TCY0 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SMIM11BQ8TCY0 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SMIM11BQ8TCY0 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SMIM11BQ8TCY0 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SMIM11BQ8TCY0 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SMIM11BQ8TCY0 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC14.73□□□□□ -0.05
SMIM11BQ8TCY0 CHML-204ENST00000638121 920 ntTSL 2 BASIC14.73□□□□□ -0.05
SMIM11BQ8TCY0 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SMIM11BQ8TCY0 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SMIM11BQ8TCY0 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC14.73□□□□□ -0.05
SMIM11BQ8TCY0 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SMIM11BQ8TCY0 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
SMIM11BQ8TCY0 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC14.72□□□□□ -0.05
SMIM11BQ8TCY0 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SMIM11BQ8TCY0 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SMIM11BQ8TCY0 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms