Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SHKBP1Q8TBC3 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SHKBP1Q8TBC3 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
SHKBP1Q8TBC3 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC23.96■■□□□ 1.43
SHKBP1Q8TBC3 AL355001.2-201ENST00000620617 1191 ntBASIC23.96■■□□□ 1.43
SHKBP1Q8TBC3 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SHKBP1Q8TBC3 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
SHKBP1Q8TBC3 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
SHKBP1Q8TBC3 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC23.95■■□□□ 1.42
SHKBP1Q8TBC3 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
SHKBP1Q8TBC3 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
SHKBP1Q8TBC3 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
SHKBP1Q8TBC3 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
SHKBP1Q8TBC3 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
SHKBP1Q8TBC3 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC23.95■■□□□ 1.42
SHKBP1Q8TBC3 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC23.94■■□□□ 1.42
SHKBP1Q8TBC3 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SHKBP1Q8TBC3 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC23.94■■□□□ 1.42
SHKBP1Q8TBC3 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC23.94■■□□□ 1.42
SHKBP1Q8TBC3 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SHKBP1Q8TBC3 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC23.94■■□□□ 1.42
SHKBP1Q8TBC3 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
SHKBP1Q8TBC3 DUX4L19-201ENST00000557448 1267 ntBASIC23.94■■□□□ 1.42
SHKBP1Q8TBC3 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SHKBP1Q8TBC3 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
SHKBP1Q8TBC3 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC23.94■■□□□ 1.42
SHKBP1Q8TBC3 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SHKBP1Q8TBC3 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
SHKBP1Q8TBC3 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC23.93■■□□□ 1.42
SHKBP1Q8TBC3 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC23.93■■□□□ 1.42
SHKBP1Q8TBC3 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
SHKBP1Q8TBC3 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
SHKBP1Q8TBC3 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC23.93■■□□□ 1.42
SHKBP1Q8TBC3 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
SHKBP1Q8TBC3 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC23.93■■□□□ 1.42
SHKBP1Q8TBC3 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
SHKBP1Q8TBC3 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC23.93■■□□□ 1.42
SHKBP1Q8TBC3 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
SHKBP1Q8TBC3 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
SHKBP1Q8TBC3 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
SHKBP1Q8TBC3 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC23.92■■□□□ 1.42
SHKBP1Q8TBC3 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SHKBP1Q8TBC3 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC23.92■■□□□ 1.42
SHKBP1Q8TBC3 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC23.92■■□□□ 1.42
SHKBP1Q8TBC3 SF1-220ENST00000626028 704 ntTSL 2 BASIC23.92■■□□□ 1.42
SHKBP1Q8TBC3 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SHKBP1Q8TBC3 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
SHKBP1Q8TBC3 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
SHKBP1Q8TBC3 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SHKBP1Q8TBC3 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC23.92■■□□□ 1.42
SHKBP1Q8TBC3 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC23.92■■□□□ 1.42
SHKBP1Q8TBC3 AC009102.2-201ENST00000606772 1639 ntBASIC23.92■■□□□ 1.42
SHKBP1Q8TBC3 SYT6-210ENST00000641643 1587 ntBASIC23.91■■□□□ 1.42
SHKBP1Q8TBC3 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC23.91■■□□□ 1.42
SHKBP1Q8TBC3 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SHKBP1Q8TBC3 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
SHKBP1Q8TBC3 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SHKBP1Q8TBC3 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
SHKBP1Q8TBC3 GRAMD4P4-201ENST00000613563 1115 ntBASIC23.91■■□□□ 1.42
SHKBP1Q8TBC3 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SHKBP1Q8TBC3 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SHKBP1Q8TBC3 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SHKBP1Q8TBC3 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SHKBP1Q8TBC3 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
SHKBP1Q8TBC3 HYI-206ENST00000372434 1025 ntTSL 5 BASIC23.9■■□□□ 1.42
SHKBP1Q8TBC3 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SHKBP1Q8TBC3 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC23.9■■□□□ 1.42
SHKBP1Q8TBC3 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
SHKBP1Q8TBC3 AF213884.3-201ENST00000563833 479 ntBASIC23.9■■□□□ 1.42
SHKBP1Q8TBC3 AL136967.2-201ENST00000623968 743 ntBASIC23.9■■□□□ 1.42
SHKBP1Q8TBC3 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SHKBP1Q8TBC3 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SHKBP1Q8TBC3 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
SHKBP1Q8TBC3 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
SHKBP1Q8TBC3 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC23.89■■□□□ 1.42
SHKBP1Q8TBC3 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
SHKBP1Q8TBC3 SERBP1P1-201ENST00000396021 1160 ntBASIC23.89■■□□□ 1.41
SHKBP1Q8TBC3 AC099791.2-201ENST00000605725 427 ntBASIC23.89■■□□□ 1.41
SHKBP1Q8TBC3 AC092171.4-201ENST00000609130 632 ntBASIC23.89■■□□□ 1.41
SHKBP1Q8TBC3 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC23.89■■□□□ 1.41
SHKBP1Q8TBC3 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC23.89■■□□□ 1.41
SHKBP1Q8TBC3 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
SHKBP1Q8TBC3 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
SHKBP1Q8TBC3 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SHKBP1Q8TBC3 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
SHKBP1Q8TBC3 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC23.88■■□□□ 1.41
SHKBP1Q8TBC3 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SHKBP1Q8TBC3 AP001330.3-201ENST00000520123 633 ntBASIC23.88■■□□□ 1.41
SHKBP1Q8TBC3 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
SHKBP1Q8TBC3 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC23.88■■□□□ 1.41
SHKBP1Q8TBC3 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC23.88■■□□□ 1.41
SHKBP1Q8TBC3 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC23.88■■□□□ 1.41
SHKBP1Q8TBC3 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SHKBP1Q8TBC3 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SHKBP1Q8TBC3 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SHKBP1Q8TBC3 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SHKBP1Q8TBC3 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SHKBP1Q8TBC3 MIR939-201ENST00000401314 82 ntBASIC23.87■■□□□ 1.41
SHKBP1Q8TBC3 RARRES2P6-201ENST00000567333 442 ntBASIC23.87■■□□□ 1.41
SHKBP1Q8TBC3 MIR4767-201ENST00000582827 78 ntBASIC23.87■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms