Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LSMEM1Q8N8F7 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
LSMEM1Q8N8F7 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
LSMEM1Q8N8F7 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LSMEM1Q8N8F7 AC103834.1-201ENST00000520383 144 ntBASIC20.85■□□□□ 0.93
LSMEM1Q8N8F7 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
LSMEM1Q8N8F7 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
LSMEM1Q8N8F7 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
LSMEM1Q8N8F7 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
LSMEM1Q8N8F7 ALDH1A3-203ENST00000557963 1670 ntBASIC20.85■□□□□ 0.93
LSMEM1Q8N8F7 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LSMEM1Q8N8F7 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LSMEM1Q8N8F7 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LSMEM1Q8N8F7 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
LSMEM1Q8N8F7 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LSMEM1Q8N8F7 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
LSMEM1Q8N8F7 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
LSMEM1Q8N8F7 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LSMEM1Q8N8F7 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.84■□□□□ 0.93
LSMEM1Q8N8F7 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
LSMEM1Q8N8F7 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LSMEM1Q8N8F7 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LSMEM1Q8N8F7 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.84■□□□□ 0.93
LSMEM1Q8N8F7 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
LSMEM1Q8N8F7 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.84■□□□□ 0.93
LSMEM1Q8N8F7 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LSMEM1Q8N8F7 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC20.84■□□□□ 0.93
LSMEM1Q8N8F7 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
LSMEM1Q8N8F7 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LSMEM1Q8N8F7 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LSMEM1Q8N8F7 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LSMEM1Q8N8F7 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.93
LSMEM1Q8N8F7 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LSMEM1Q8N8F7 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
LSMEM1Q8N8F7 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
LSMEM1Q8N8F7 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
LSMEM1Q8N8F7 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
LSMEM1Q8N8F7 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
LSMEM1Q8N8F7 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
LSMEM1Q8N8F7 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.83■□□□□ 0.93
LSMEM1Q8N8F7 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
LSMEM1Q8N8F7 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LSMEM1Q8N8F7 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
LSMEM1Q8N8F7 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
LSMEM1Q8N8F7 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.83■□□□□ 0.92
LSMEM1Q8N8F7 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
LSMEM1Q8N8F7 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
LSMEM1Q8N8F7 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
LSMEM1Q8N8F7 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.82■□□□□ 0.92
LSMEM1Q8N8F7 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
LSMEM1Q8N8F7 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
LSMEM1Q8N8F7 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LSMEM1Q8N8F7 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.82■□□□□ 0.92
LSMEM1Q8N8F7 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
LSMEM1Q8N8F7 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LSMEM1Q8N8F7 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LSMEM1Q8N8F7 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.81■□□□□ 0.92
LSMEM1Q8N8F7 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.81■□□□□ 0.92
LSMEM1Q8N8F7 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
LSMEM1Q8N8F7 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.81■□□□□ 0.92
LSMEM1Q8N8F7 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.81■□□□□ 0.92
LSMEM1Q8N8F7 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.81■□□□□ 0.92
LSMEM1Q8N8F7 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LSMEM1Q8N8F7 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
LSMEM1Q8N8F7 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
LSMEM1Q8N8F7 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
LSMEM1Q8N8F7 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LSMEM1Q8N8F7 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LSMEM1Q8N8F7 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LSMEM1Q8N8F7 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LSMEM1Q8N8F7 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
LSMEM1Q8N8F7 YBX1P4-201ENST00000392794 808 ntBASIC20.8■□□□□ 0.92
LSMEM1Q8N8F7 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
LSMEM1Q8N8F7 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LSMEM1Q8N8F7 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LSMEM1Q8N8F7 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
LSMEM1Q8N8F7 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.79■□□□□ 0.92
LSMEM1Q8N8F7 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LSMEM1Q8N8F7 AC004448.1-201ENST00000458332 883 ntBASIC20.79■□□□□ 0.92
LSMEM1Q8N8F7 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LSMEM1Q8N8F7 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.79■□□□□ 0.92
LSMEM1Q8N8F7 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LSMEM1Q8N8F7 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.78■□□□□ 0.92
LSMEM1Q8N8F7 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.78■□□□□ 0.92
LSMEM1Q8N8F7 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.78■□□□□ 0.92
LSMEM1Q8N8F7 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
LSMEM1Q8N8F7 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LSMEM1Q8N8F7 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
LSMEM1Q8N8F7 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
LSMEM1Q8N8F7 AC103724.3-201ENST00000564481 992 ntBASIC20.78■□□□□ 0.92
LSMEM1Q8N8F7 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
LSMEM1Q8N8F7 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LSMEM1Q8N8F7 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LSMEM1Q8N8F7 ANOS2P-203ENST00000472227 1816 ntBASIC20.78■□□□□ 0.92
LSMEM1Q8N8F7 AC092068.2-201ENST00000590491 1708 ntBASIC20.78■□□□□ 0.92
LSMEM1Q8N8F7 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
LSMEM1Q8N8F7 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LSMEM1Q8N8F7 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LSMEM1Q8N8F7 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.77■□□□□ 0.92
LSMEM1Q8N8F7 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms