Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC23.27■■□□□ 1.32
PAF1Q8N7H5 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PAF1Q8N7H5 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PAF1Q8N7H5 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC23.26■■□□□ 1.31
PAF1Q8N7H5 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
PAF1Q8N7H5 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PAF1Q8N7H5 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PAF1Q8N7H5 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC23.26■■□□□ 1.31
PAF1Q8N7H5 UNC93B8-201ENST00000511903 705 ntBASIC23.26■■□□□ 1.31
PAF1Q8N7H5 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
PAF1Q8N7H5 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
PAF1Q8N7H5 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PAF1Q8N7H5 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PAF1Q8N7H5 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC23.25■■□□□ 1.31
PAF1Q8N7H5 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PAF1Q8N7H5 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PAF1Q8N7H5 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PAF1Q8N7H5 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PAF1Q8N7H5 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC23.25■■□□□ 1.31
PAF1Q8N7H5 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC23.25■■□□□ 1.31
PAF1Q8N7H5 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
PAF1Q8N7H5 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
PAF1Q8N7H5 TMEM202-AS1-202ENST00000565181 2325 ntBASIC23.25■■□□□ 1.31
PAF1Q8N7H5 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC23.24■■□□□ 1.31
PAF1Q8N7H5 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
PAF1Q8N7H5 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PAF1Q8N7H5 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PAF1Q8N7H5 AL356441.2-201ENST00000443009 864 ntBASIC23.24■■□□□ 1.31
PAF1Q8N7H5 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
PAF1Q8N7H5 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PAF1Q8N7H5 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PAF1Q8N7H5 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC23.24■■□□□ 1.31
PAF1Q8N7H5 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC23.24■■□□□ 1.31
PAF1Q8N7H5 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PAF1Q8N7H5 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC23.23■■□□□ 1.31
PAF1Q8N7H5 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
PAF1Q8N7H5 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC23.23■■□□□ 1.31
PAF1Q8N7H5 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PAF1Q8N7H5 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PAF1Q8N7H5 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC23.23■■□□□ 1.31
PAF1Q8N7H5 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC23.23■■□□□ 1.31
PAF1Q8N7H5 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PAF1Q8N7H5 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
PAF1Q8N7H5 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC23.23■■□□□ 1.31
PAF1Q8N7H5 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC23.22■■□□□ 1.31
PAF1Q8N7H5 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PAF1Q8N7H5 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
PAF1Q8N7H5 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC23.22■■□□□ 1.31
PAF1Q8N7H5 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC23.22■■□□□ 1.31
PAF1Q8N7H5 AC131212.1-201ENST00000613771 668 ntBASIC23.22■■□□□ 1.31
PAF1Q8N7H5 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC23.22■■□□□ 1.31
PAF1Q8N7H5 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
PAF1Q8N7H5 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
PAF1Q8N7H5 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC23.22■■□□□ 1.31
PAF1Q8N7H5 LINC01124-201ENST00000409786 2117 ntBASIC23.21■■□□□ 1.31
PAF1Q8N7H5 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PAF1Q8N7H5 SNX5-217ENST00000606557 1087 ntBASIC23.21■■□□□ 1.31
PAF1Q8N7H5 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
PAF1Q8N7H5 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC23.21■■□□□ 1.31
PAF1Q8N7H5 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
PAF1Q8N7H5 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
PAF1Q8N7H5 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
PAF1Q8N7H5 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC23.21■■□□□ 1.31
PAF1Q8N7H5 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
PAF1Q8N7H5 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.31
PAF1Q8N7H5 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PAF1Q8N7H5 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PAF1Q8N7H5 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PAF1Q8N7H5 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
PAF1Q8N7H5 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PAF1Q8N7H5 AC004448.1-201ENST00000458332 883 ntBASIC23.2■■□□□ 1.3
PAF1Q8N7H5 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PAF1Q8N7H5 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PAF1Q8N7H5 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PAF1Q8N7H5 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC23.2■■□□□ 1.3
PAF1Q8N7H5 AC131274.2-201ENST00000580697 1507 ntBASIC23.19■■□□□ 1.3
PAF1Q8N7H5 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PAF1Q8N7H5 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PAF1Q8N7H5 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC23.19■■□□□ 1.3
PAF1Q8N7H5 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
PAF1Q8N7H5 EED-207ENST00000528180 1745 ntTSL 5 BASIC23.19■■□□□ 1.3
PAF1Q8N7H5 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.19■■□□□ 1.3
PAF1Q8N7H5 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PAF1Q8N7H5 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PAF1Q8N7H5 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC23.18■■□□□ 1.3
PAF1Q8N7H5 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PAF1Q8N7H5 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC23.18■■□□□ 1.3
PAF1Q8N7H5 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
PAF1Q8N7H5 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC23.18■■□□□ 1.3
PAF1Q8N7H5 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC23.18■■□□□ 1.3
PAF1Q8N7H5 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
PAF1Q8N7H5 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC23.18■■□□□ 1.3
PAF1Q8N7H5 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PAF1Q8N7H5 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PAF1Q8N7H5 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
PAF1Q8N7H5 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
PAF1Q8N7H5 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC23.17■■□□□ 1.3
PAF1Q8N7H5 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PAF1Q8N7H5 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
PAF1Q8N7H5 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms