Protein–RNA interactions for Protein: Q8N535

LINC00471, Putative uncharacterized protein encoded by LINC00471, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00471Q8N535 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LINC00471Q8N535 AL592293.1-201ENST00000502889 1188 ntBASIC20.82■□□□□ 0.92
LINC00471Q8N535 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
LINC00471Q8N535 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
LINC00471Q8N535 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LINC00471Q8N535 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LINC00471Q8N535 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
LINC00471Q8N535 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
LINC00471Q8N535 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.82■□□□□ 0.92
LINC00471Q8N535 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.81■□□□□ 0.92
LINC00471Q8N535 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LINC00471Q8N535 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LINC00471Q8N535 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.81■□□□□ 0.92
LINC00471Q8N535 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
LINC00471Q8N535 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.81■□□□□ 0.92
LINC00471Q8N535 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC20.81■□□□□ 0.92
LINC00471Q8N535 AC011551.1-201ENST00000614101 683 ntBASIC20.81■□□□□ 0.92
LINC00471Q8N535 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.81■□□□□ 0.92
LINC00471Q8N535 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
LINC00471Q8N535 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
LINC00471Q8N535 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LINC00471Q8N535 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LINC00471Q8N535 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LINC00471Q8N535 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LINC00471Q8N535 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
LINC00471Q8N535 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.8■□□□□ 0.92
LINC00471Q8N535 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.8■□□□□ 0.92
LINC00471Q8N535 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LINC00471Q8N535 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
LINC00471Q8N535 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.79■□□□□ 0.92
LINC00471Q8N535 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
LINC00471Q8N535 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.79■□□□□ 0.92
LINC00471Q8N535 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
LINC00471Q8N535 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LINC00471Q8N535 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LINC00471Q8N535 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LINC00471Q8N535 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
LINC00471Q8N535 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.79■□□□□ 0.92
LINC00471Q8N535 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
LINC00471Q8N535 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC20.79■□□□□ 0.92
LINC00471Q8N535 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
LINC00471Q8N535 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LINC00471Q8N535 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
LINC00471Q8N535 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.79■□□□□ 0.92
LINC00471Q8N535 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
LINC00471Q8N535 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LINC00471Q8N535 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LINC00471Q8N535 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.78■□□□□ 0.92
LINC00471Q8N535 SPCS2P3-201ENST00000500401 656 ntBASIC20.78■□□□□ 0.92
LINC00471Q8N535 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LINC00471Q8N535 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
LINC00471Q8N535 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LINC00471Q8N535 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
LINC00471Q8N535 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LINC00471Q8N535 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LINC00471Q8N535 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LINC00471Q8N535 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LINC00471Q8N535 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LINC00471Q8N535 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LINC00471Q8N535 LONRF2P2-201ENST00000439212 571 ntBASIC20.77■□□□□ 0.92
LINC00471Q8N535 MBP-237ENST00000579129 1052 ntTSL 5 BASIC20.77■□□□□ 0.92
LINC00471Q8N535 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LINC00471Q8N535 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
LINC00471Q8N535 ALDH1A3-203ENST00000557963 1670 ntBASIC20.77■□□□□ 0.91
LINC00471Q8N535 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
LINC00471Q8N535 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LINC00471Q8N535 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
LINC00471Q8N535 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
LINC00471Q8N535 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LINC00471Q8N535 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.76■□□□□ 0.91
LINC00471Q8N535 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
LINC00471Q8N535 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LINC00471Q8N535 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.76■□□□□ 0.91
LINC00471Q8N535 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
LINC00471Q8N535 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
LINC00471Q8N535 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.75■□□□□ 0.91
LINC00471Q8N535 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
LINC00471Q8N535 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
LINC00471Q8N535 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.75■□□□□ 0.91
LINC00471Q8N535 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LINC00471Q8N535 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LINC00471Q8N535 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.75■□□□□ 0.91
LINC00471Q8N535 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LINC00471Q8N535 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
LINC00471Q8N535 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
LINC00471Q8N535 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LINC00471Q8N535 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.74■□□□□ 0.91
LINC00471Q8N535 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LINC00471Q8N535 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
LINC00471Q8N535 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LINC00471Q8N535 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
LINC00471Q8N535 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LINC00471Q8N535 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.73■□□□□ 0.91
LINC00471Q8N535 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LINC00471Q8N535 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LINC00471Q8N535 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
LINC00471Q8N535 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LINC00471Q8N535 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
LINC00471Q8N535 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
LINC00471Q8N535 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms