Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
UBR1Q8IWV7 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
UBR1Q8IWV7 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC33.07■■■□□ 2.88
UBR1Q8IWV7 MIR6089-201ENST00000616698 64 ntBASIC33.07■■■□□ 2.88
UBR1Q8IWV7 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC33.06■■■□□ 2.88
UBR1Q8IWV7 AC126544.1-201ENST00000580842 1059 ntBASIC33.06■■■□□ 2.88
UBR1Q8IWV7 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC33.06■■■□□ 2.88
UBR1Q8IWV7 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC33.06■■■□□ 2.88
UBR1Q8IWV7 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC33.06■■■□□ 2.88
UBR1Q8IWV7 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC33.06■■■□□ 2.88
UBR1Q8IWV7 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC33.06■■■□□ 2.88
UBR1Q8IWV7 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC33.06■■■□□ 2.88
UBR1Q8IWV7 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC33.05■■■□□ 2.88
UBR1Q8IWV7 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC33.05■■■□□ 2.88
UBR1Q8IWV7 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
UBR1Q8IWV7 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC33.05■■■□□ 2.88
UBR1Q8IWV7 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
UBR1Q8IWV7 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
UBR1Q8IWV7 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC33.05■■■□□ 2.88
UBR1Q8IWV7 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
UBR1Q8IWV7 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
UBR1Q8IWV7 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
UBR1Q8IWV7 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
UBR1Q8IWV7 AL358852.1-201ENST00000623174 1268 ntBASIC33.05■■■□□ 2.88
UBR1Q8IWV7 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC33.04■■■□□ 2.88
UBR1Q8IWV7 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC33.04■■■□□ 2.88
UBR1Q8IWV7 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC33.04■■■□□ 2.88
UBR1Q8IWV7 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
UBR1Q8IWV7 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
UBR1Q8IWV7 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC33.03■■■□□ 2.88
UBR1Q8IWV7 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
UBR1Q8IWV7 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC33.03■■■□□ 2.88
UBR1Q8IWV7 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC33.03■■■□□ 2.88
UBR1Q8IWV7 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC33.03■■■□□ 2.88
UBR1Q8IWV7 VGF-203ENST00000611537 1622 ntTSL 5 BASIC33.03■■■□□ 2.88
UBR1Q8IWV7 IGHV3-19-201ENST00000521488 291 ntBASIC33.03■■■□□ 2.88
UBR1Q8IWV7 AICDA-202ENST00000537228 667 ntTSL 5 BASIC33.03■■■□□ 2.88
UBR1Q8IWV7 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC33.03■■■□□ 2.88
UBR1Q8IWV7 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC33.03■■■□□ 2.88
UBR1Q8IWV7 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
UBR1Q8IWV7 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC33.03■■■□□ 2.88
UBR1Q8IWV7 CCDC92B-201ENST00000575506 885 ntBASIC33.02■■■□□ 2.88
UBR1Q8IWV7 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC33.02■■■□□ 2.88
UBR1Q8IWV7 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
UBR1Q8IWV7 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
UBR1Q8IWV7 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC33.02■■■□□ 2.88
UBR1Q8IWV7 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC33.02■■■□□ 2.88
UBR1Q8IWV7 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC33.01■■■□□ 2.88
UBR1Q8IWV7 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC33.01■■■□□ 2.88
UBR1Q8IWV7 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC33.01■■■□□ 2.87
UBR1Q8IWV7 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC33.01■■■□□ 2.87
UBR1Q8IWV7 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC33.01■■■□□ 2.87
UBR1Q8IWV7 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC33■■■□□ 2.87
UBR1Q8IWV7 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC33■■■□□ 2.87
UBR1Q8IWV7 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
UBR1Q8IWV7 MIR6084-201ENST00000622012 110 ntBASIC32.99■■■□□ 2.87
UBR1Q8IWV7 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC32.99■■■□□ 2.87
UBR1Q8IWV7 NME4-202ENST00000382940 766 ntTSL 3 BASIC32.99■■■□□ 2.87
UBR1Q8IWV7 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC32.99■■■□□ 2.87
UBR1Q8IWV7 KRT18P14-201ENST00000534205 1250 ntBASIC32.99■■■□□ 2.87
UBR1Q8IWV7 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC32.99■■■□□ 2.87
UBR1Q8IWV7 NME4-211ENST00000620944 1193 ntTSL 2 BASIC32.99■■■□□ 2.87
UBR1Q8IWV7 GTSE1-AS1-202ENST00000623117 1518 ntBASIC32.99■■■□□ 2.87
UBR1Q8IWV7 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC32.99■■■□□ 2.87
UBR1Q8IWV7 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC32.99■■■□□ 2.87
UBR1Q8IWV7 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC32.98■■■□□ 2.87
UBR1Q8IWV7 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
UBR1Q8IWV7 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
UBR1Q8IWV7 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC32.98■■■□□ 2.87
UBR1Q8IWV7 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC32.98■■■□□ 2.87
UBR1Q8IWV7 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC32.97■■■□□ 2.87
UBR1Q8IWV7 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC32.97■■■□□ 2.87
UBR1Q8IWV7 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC32.97■■■□□ 2.87
UBR1Q8IWV7 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC32.97■■■□□ 2.87
UBR1Q8IWV7 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC32.97■■■□□ 2.87
UBR1Q8IWV7 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
UBR1Q8IWV7 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC32.97■■■□□ 2.87
UBR1Q8IWV7 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC32.97■■■□□ 2.87
UBR1Q8IWV7 MIR572-201ENST00000384983 95 ntBASIC32.97■■■□□ 2.87
UBR1Q8IWV7 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC32.97■■■□□ 2.87
UBR1Q8IWV7 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC32.96■■■□□ 2.87
UBR1Q8IWV7 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC32.96■■■□□ 2.87
UBR1Q8IWV7 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC32.96■■■□□ 2.87
UBR1Q8IWV7 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC32.96■■■□□ 2.87
UBR1Q8IWV7 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC32.96■■■□□ 2.87
UBR1Q8IWV7 TERF1P2-201ENST00000583350 1212 ntBASIC32.96■■■□□ 2.87
UBR1Q8IWV7 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC32.96■■■□□ 2.87
UBR1Q8IWV7 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.87
UBR1Q8IWV7 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC32.95■■■□□ 2.87
UBR1Q8IWV7 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC32.95■■■□□ 2.87
UBR1Q8IWV7 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC32.95■■■□□ 2.87
UBR1Q8IWV7 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC32.95■■■□□ 2.86
UBR1Q8IWV7 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC32.94■■■□□ 2.86
UBR1Q8IWV7 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
UBR1Q8IWV7 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC32.94■■■□□ 2.86
UBR1Q8IWV7 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC32.94■■■□□ 2.86
UBR1Q8IWV7 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
UBR1Q8IWV7 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
UBR1Q8IWV7 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC32.94■■■□□ 2.86
UBR1Q8IWV7 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC32.94■■■□□ 2.86
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms