Protein–RNA interactions for Protein: Q86UF4

CCDC190, Coiled-coil domain-containing protein 190, humanhuman

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC190Q86UF4 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC190Q86UF4 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.9■□□□□ 0.78
CCDC190Q86UF4 SUZ12P1-203ENST00000578195 985 ntBASIC19.9■□□□□ 0.78
CCDC190Q86UF4 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC190Q86UF4 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CCDC190Q86UF4 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC190Q86UF4 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
CCDC190Q86UF4 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CCDC190Q86UF4 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC19.89■□□□□ 0.77
CCDC190Q86UF4 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.89■□□□□ 0.77
CCDC190Q86UF4 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.89■□□□□ 0.77
CCDC190Q86UF4 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.89■□□□□ 0.77
CCDC190Q86UF4 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC190Q86UF4 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC190Q86UF4 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC190Q86UF4 FBXW4P1-201ENST00000426721 2239 ntBASIC19.88■□□□□ 0.77
CCDC190Q86UF4 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC190Q86UF4 C11orf96-202ENST00000528572 1834 ntBASIC19.88■□□□□ 0.77
CCDC190Q86UF4 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC190Q86UF4 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC190Q86UF4 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
CCDC190Q86UF4 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC190Q86UF4 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC190Q86UF4 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC190Q86UF4 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC190Q86UF4 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC190Q86UF4 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC190Q86UF4 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.88■□□□□ 0.77
CCDC190Q86UF4 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CCDC190Q86UF4 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC190Q86UF4 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC190Q86UF4 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC190Q86UF4 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC190Q86UF4 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC190Q86UF4 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC190Q86UF4 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC190Q86UF4 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.87■□□□□ 0.77
CCDC190Q86UF4 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC190Q86UF4 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC190Q86UF4 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.86■□□□□ 0.77
CCDC190Q86UF4 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.86■□□□□ 0.77
CCDC190Q86UF4 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC190Q86UF4 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC190Q86UF4 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.86■□□□□ 0.77
CCDC190Q86UF4 AC148477.6-201ENST00000623746 465 ntBASIC19.86■□□□□ 0.77
CCDC190Q86UF4 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC190Q86UF4 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC190Q86UF4 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.86■□□□□ 0.77
CCDC190Q86UF4 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC190Q86UF4 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CCDC190Q86UF4 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC190Q86UF4 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC190Q86UF4 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC190Q86UF4 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC190Q86UF4 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.85■□□□□ 0.77
CCDC190Q86UF4 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC190Q86UF4 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CCDC190Q86UF4 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC190Q86UF4 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC190Q86UF4 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC190Q86UF4 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC190Q86UF4 AC139530.1-201ENST00000575312 1977 ntBASIC19.84■□□□□ 0.77
CCDC190Q86UF4 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC190Q86UF4 AC092053.2-201ENST00000640557 1818 ntBASIC19.83■□□□□ 0.77
CCDC190Q86UF4 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC190Q86UF4 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
CCDC190Q86UF4 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC190Q86UF4 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
CCDC190Q86UF4 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.83■□□□□ 0.77
CCDC190Q86UF4 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC190Q86UF4 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC190Q86UF4 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC190Q86UF4 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.83■□□□□ 0.76
CCDC190Q86UF4 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.83■□□□□ 0.76
CCDC190Q86UF4 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
CCDC190Q86UF4 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
CCDC190Q86UF4 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC190Q86UF4 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
CCDC190Q86UF4 AC026310.3-201ENST00000625186 2373 ntBASIC19.83■□□□□ 0.76
CCDC190Q86UF4 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
CCDC190Q86UF4 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC190Q86UF4 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC190Q86UF4 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.82■□□□□ 0.76
CCDC190Q86UF4 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC190Q86UF4 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
CCDC190Q86UF4 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC190Q86UF4 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC190Q86UF4 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC190Q86UF4 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC190Q86UF4 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.81■□□□□ 0.76
CCDC190Q86UF4 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CCDC190Q86UF4 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC190Q86UF4 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC190Q86UF4 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC190Q86UF4 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC190Q86UF4 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC190Q86UF4 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC190Q86UF4 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CCDC190Q86UF4 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC190Q86UF4 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms