Protein–RNA interactions for Protein: Q6ZMD2

SPNS3, Protein spinster homolog 3, humanhuman

Predictions only

Length 512 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3Q6ZMD2 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
SPNS3Q6ZMD2 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC19.65■□□□□ 0.74
SPNS3Q6ZMD2 AC004911.1-201ENST00000416316 871 ntBASIC19.65■□□□□ 0.74
SPNS3Q6ZMD2 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.65■□□□□ 0.74
SPNS3Q6ZMD2 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC19.65■□□□□ 0.74
SPNS3Q6ZMD2 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SPNS3Q6ZMD2 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.65■□□□□ 0.74
SPNS3Q6ZMD2 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.65■□□□□ 0.74
SPNS3Q6ZMD2 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
SPNS3Q6ZMD2 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SPNS3Q6ZMD2 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SPNS3Q6ZMD2 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SPNS3Q6ZMD2 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SPNS3Q6ZMD2 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.64■□□□□ 0.73
SPNS3Q6ZMD2 AC008764.7-201ENST00000593779 1081 ntBASIC19.64■□□□□ 0.73
SPNS3Q6ZMD2 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.64■□□□□ 0.73
SPNS3Q6ZMD2 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.64■□□□□ 0.73
SPNS3Q6ZMD2 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SPNS3Q6ZMD2 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
SPNS3Q6ZMD2 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
SPNS3Q6ZMD2 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
SPNS3Q6ZMD2 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SPNS3Q6ZMD2 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SPNS3Q6ZMD2 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SPNS3Q6ZMD2 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.63■□□□□ 0.73
SPNS3Q6ZMD2 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.63■□□□□ 0.73
SPNS3Q6ZMD2 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.63■□□□□ 0.73
SPNS3Q6ZMD2 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
SPNS3Q6ZMD2 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SPNS3Q6ZMD2 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
SPNS3Q6ZMD2 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SPNS3Q6ZMD2 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SPNS3Q6ZMD2 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
SPNS3Q6ZMD2 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.62■□□□□ 0.73
SPNS3Q6ZMD2 AC099791.1-201ENST00000416440 715 ntBASIC19.62■□□□□ 0.73
SPNS3Q6ZMD2 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SPNS3Q6ZMD2 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.62■□□□□ 0.73
SPNS3Q6ZMD2 AL138724.1-201ENST00000606771 1088 ntBASIC19.62■□□□□ 0.73
SPNS3Q6ZMD2 AC011298.3-201ENST00000615796 283 ntBASIC19.62■□□□□ 0.73
SPNS3Q6ZMD2 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.62■□□□□ 0.73
SPNS3Q6ZMD2 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.62■□□□□ 0.73
SPNS3Q6ZMD2 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
SPNS3Q6ZMD2 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.62■□□□□ 0.73
SPNS3Q6ZMD2 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
SPNS3Q6ZMD2 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SPNS3Q6ZMD2 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SPNS3Q6ZMD2 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.61■□□□□ 0.73
SPNS3Q6ZMD2 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SPNS3Q6ZMD2 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SPNS3Q6ZMD2 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.61■□□□□ 0.73
SPNS3Q6ZMD2 HLA-L-209ENST00000420110 1011 ntBASIC19.61■□□□□ 0.73
SPNS3Q6ZMD2 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.61■□□□□ 0.73
SPNS3Q6ZMD2 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SPNS3Q6ZMD2 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SPNS3Q6ZMD2 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.61■□□□□ 0.73
SPNS3Q6ZMD2 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.61■□□□□ 0.73
SPNS3Q6ZMD2 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SPNS3Q6ZMD2 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SPNS3Q6ZMD2 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC19.61■□□□□ 0.73
SPNS3Q6ZMD2 THRA-202ENST00000394121 2260 ntTSL 2 BASIC19.6■□□□□ 0.73
SPNS3Q6ZMD2 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
SPNS3Q6ZMD2 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SPNS3Q6ZMD2 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SPNS3Q6ZMD2 AC133561.1-201ENST00000568600 2415 ntBASIC19.6■□□□□ 0.73
SPNS3Q6ZMD2 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.6■□□□□ 0.73
SPNS3Q6ZMD2 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SPNS3Q6ZMD2 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SPNS3Q6ZMD2 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SPNS3Q6ZMD2 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
SPNS3Q6ZMD2 YBX1P1-201ENST00000445822 960 ntBASIC19.6■□□□□ 0.73
SPNS3Q6ZMD2 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.6■□□□□ 0.73
SPNS3Q6ZMD2 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.6■□□□□ 0.73
SPNS3Q6ZMD2 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.6■□□□□ 0.73
SPNS3Q6ZMD2 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
SPNS3Q6ZMD2 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SPNS3Q6ZMD2 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SPNS3Q6ZMD2 SERBP1P1-201ENST00000396021 1160 ntBASIC19.59■□□□□ 0.73
SPNS3Q6ZMD2 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.59■□□□□ 0.73
SPNS3Q6ZMD2 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.59■□□□□ 0.73
SPNS3Q6ZMD2 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SPNS3Q6ZMD2 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SPNS3Q6ZMD2 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
SPNS3Q6ZMD2 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SPNS3Q6ZMD2 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SPNS3Q6ZMD2 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SPNS3Q6ZMD2 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SPNS3Q6ZMD2 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
SPNS3Q6ZMD2 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SPNS3Q6ZMD2 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.58■□□□□ 0.72
SPNS3Q6ZMD2 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SPNS3Q6ZMD2 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
SPNS3Q6ZMD2 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC19.58■□□□□ 0.72
SPNS3Q6ZMD2 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.57■□□□□ 0.72
SPNS3Q6ZMD2 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SPNS3Q6ZMD2 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SPNS3Q6ZMD2 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SPNS3Q6ZMD2 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
SPNS3Q6ZMD2 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SPNS3Q6ZMD2 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.57■□□□□ 0.72
SPNS3Q6ZMD2 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms