Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
NIPAL3Q6P499 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.69■□□□□ 0.9
NIPAL3Q6P499 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
NIPAL3Q6P499 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NIPAL3Q6P499 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NIPAL3Q6P499 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.69■□□□□ 0.9
NIPAL3Q6P499 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.69■□□□□ 0.9
NIPAL3Q6P499 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
NIPAL3Q6P499 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NIPAL3Q6P499 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
NIPAL3Q6P499 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NIPAL3Q6P499 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.68■□□□□ 0.9
NIPAL3Q6P499 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.68■□□□□ 0.9
NIPAL3Q6P499 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
NIPAL3Q6P499 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NIPAL3Q6P499 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.68■□□□□ 0.9
NIPAL3Q6P499 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
NIPAL3Q6P499 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NIPAL3Q6P499 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NIPAL3Q6P499 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.68■□□□□ 0.9
NIPAL3Q6P499 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
NIPAL3Q6P499 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NIPAL3Q6P499 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
NIPAL3Q6P499 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.67■□□□□ 0.9
NIPAL3Q6P499 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
NIPAL3Q6P499 AL031848.2-201ENST00000607670 837 ntBASIC20.67■□□□□ 0.9
NIPAL3Q6P499 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NIPAL3Q6P499 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
NIPAL3Q6P499 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NIPAL3Q6P499 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NIPAL3Q6P499 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NIPAL3Q6P499 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NIPAL3Q6P499 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NIPAL3Q6P499 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NIPAL3Q6P499 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NIPAL3Q6P499 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NIPAL3Q6P499 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NIPAL3Q6P499 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
NIPAL3Q6P499 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NIPAL3Q6P499 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NIPAL3Q6P499 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NIPAL3Q6P499 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.66■□□□□ 0.9
NIPAL3Q6P499 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.66■□□□□ 0.9
NIPAL3Q6P499 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.66■□□□□ 0.9
NIPAL3Q6P499 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NIPAL3Q6P499 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NIPAL3Q6P499 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NIPAL3Q6P499 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NIPAL3Q6P499 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NIPAL3Q6P499 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
NIPAL3Q6P499 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
NIPAL3Q6P499 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NIPAL3Q6P499 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.65■□□□□ 0.9
NIPAL3Q6P499 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
NIPAL3Q6P499 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
NIPAL3Q6P499 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NIPAL3Q6P499 MIR4281-201ENST00000580852 62 ntBASIC20.64■□□□□ 0.89
NIPAL3Q6P499 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.64■□□□□ 0.89
NIPAL3Q6P499 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
NIPAL3Q6P499 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
NIPAL3Q6P499 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
NIPAL3Q6P499 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
NIPAL3Q6P499 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
NIPAL3Q6P499 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
NIPAL3Q6P499 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NIPAL3Q6P499 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.63■□□□□ 0.89
NIPAL3Q6P499 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.63■□□□□ 0.89
NIPAL3Q6P499 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.63■□□□□ 0.89
NIPAL3Q6P499 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NIPAL3Q6P499 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NIPAL3Q6P499 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
NIPAL3Q6P499 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NIPAL3Q6P499 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.62■□□□□ 0.89
NIPAL3Q6P499 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NIPAL3Q6P499 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.62■□□□□ 0.89
NIPAL3Q6P499 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NIPAL3Q6P499 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NIPAL3Q6P499 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NIPAL3Q6P499 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
NIPAL3Q6P499 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NIPAL3Q6P499 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
NIPAL3Q6P499 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.62■□□□□ 0.89
NIPAL3Q6P499 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NIPAL3Q6P499 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NIPAL3Q6P499 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NIPAL3Q6P499 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
NIPAL3Q6P499 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NIPAL3Q6P499 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NIPAL3Q6P499 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NIPAL3Q6P499 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
NIPAL3Q6P499 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.61■□□□□ 0.89
NIPAL3Q6P499 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NIPAL3Q6P499 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
NIPAL3Q6P499 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NIPAL3Q6P499 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NIPAL3Q6P499 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.6■□□□□ 0.89
NIPAL3Q6P499 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NIPAL3Q6P499 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NIPAL3Q6P499 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NIPAL3Q6P499 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms