Protein–RNA interactions for Protein: Q6IEG0

SNRNP48, U11/U12 small nuclear ribonucleoprotein 48 kDa protein, humanhuman

Known RBP Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48Q6IEG0 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
SNRNP48Q6IEG0 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
SNRNP48Q6IEG0 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SNRNP48Q6IEG0 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
SNRNP48Q6IEG0 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC26.23■■□□□ 1.79
SNRNP48Q6IEG0 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SNRNP48Q6IEG0 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SNRNP48Q6IEG0 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SNRNP48Q6IEG0 LGR4-203ENST00000480977 492 ntTSL 2 BASIC26.22■■□□□ 1.79
SNRNP48Q6IEG0 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC26.22■■□□□ 1.79
SNRNP48Q6IEG0 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
SNRNP48Q6IEG0 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
SNRNP48Q6IEG0 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
SNRNP48Q6IEG0 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC26.22■■□□□ 1.79
SNRNP48Q6IEG0 AL161729.1-201ENST00000604104 1402 ntBASIC26.22■■□□□ 1.79
SNRNP48Q6IEG0 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SNRNP48Q6IEG0 RARRES2P6-201ENST00000567333 442 ntBASIC26.21■■□□□ 1.79
SNRNP48Q6IEG0 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SNRNP48Q6IEG0 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC26.21■■□□□ 1.79
SNRNP48Q6IEG0 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC26.2■■□□□ 1.79
SNRNP48Q6IEG0 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
SNRNP48Q6IEG0 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC26.2■■□□□ 1.78
SNRNP48Q6IEG0 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
SNRNP48Q6IEG0 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
SNRNP48Q6IEG0 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
SNRNP48Q6IEG0 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
SNRNP48Q6IEG0 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
SNRNP48Q6IEG0 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC26.19■■□□□ 1.78
SNRNP48Q6IEG0 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC26.19■■□□□ 1.78
SNRNP48Q6IEG0 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC26.18■■□□□ 1.78
SNRNP48Q6IEG0 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SNRNP48Q6IEG0 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC26.18■■□□□ 1.78
SNRNP48Q6IEG0 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SNRNP48Q6IEG0 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
SNRNP48Q6IEG0 AC011298.3-201ENST00000615796 283 ntBASIC26.18■■□□□ 1.78
SNRNP48Q6IEG0 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC26.18■■□□□ 1.78
SNRNP48Q6IEG0 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SNRNP48Q6IEG0 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC26.18■■□□□ 1.78
SNRNP48Q6IEG0 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
SNRNP48Q6IEG0 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SNRNP48Q6IEG0 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC26.18■■□□□ 1.78
SNRNP48Q6IEG0 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
SNRNP48Q6IEG0 USF2-207ENST00000595068 1612 ntTSL 5 BASIC26.17■■□□□ 1.78
SNRNP48Q6IEG0 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
SNRNP48Q6IEG0 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SNRNP48Q6IEG0 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC26.17■■□□□ 1.78
SNRNP48Q6IEG0 AC091305.1-201ENST00000479476 895 ntBASIC26.17■■□□□ 1.78
SNRNP48Q6IEG0 MAG-206ENST00000597035 542 ntTSL 4 BASIC26.17■■□□□ 1.78
SNRNP48Q6IEG0 AL138724.1-201ENST00000606771 1088 ntBASIC26.17■■□□□ 1.78
SNRNP48Q6IEG0 AC241377.3-202ENST00000626088 1088 ntBASIC26.17■■□□□ 1.78
SNRNP48Q6IEG0 AC241585.3-202ENST00000628937 1088 ntBASIC26.17■■□□□ 1.78
SNRNP48Q6IEG0 AC245100.8-202ENST00000629247 1058 ntBASIC26.17■■□□□ 1.78
SNRNP48Q6IEG0 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SNRNP48Q6IEG0 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
SNRNP48Q6IEG0 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SNRNP48Q6IEG0 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SNRNP48Q6IEG0 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
SNRNP48Q6IEG0 AC022211.4-201ENST00000625094 2161 ntBASIC26.16■■□□□ 1.78
SNRNP48Q6IEG0 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SNRNP48Q6IEG0 AC006455.2-201ENST00000429931 906 ntBASIC26.16■■□□□ 1.78
SNRNP48Q6IEG0 STOX2-205ENST00000513034 807 ntTSL 3 BASIC26.16■■□□□ 1.78
SNRNP48Q6IEG0 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
SNRNP48Q6IEG0 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC26.16■■□□□ 1.78
SNRNP48Q6IEG0 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
SNRNP48Q6IEG0 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.78
SNRNP48Q6IEG0 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC26.15■■□□□ 1.78
SNRNP48Q6IEG0 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC26.15■■□□□ 1.78
SNRNP48Q6IEG0 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SNRNP48Q6IEG0 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC26.15■■□□□ 1.78
SNRNP48Q6IEG0 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC26.14■■□□□ 1.78
SNRNP48Q6IEG0 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
SNRNP48Q6IEG0 AC026271.2-201ENST00000428091 497 ntBASIC26.14■■□□□ 1.78
SNRNP48Q6IEG0 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC26.14■■□□□ 1.78
SNRNP48Q6IEG0 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
SNRNP48Q6IEG0 NKILA-201ENST00000613231 537 ntTSL 4 BASIC26.14■■□□□ 1.78
SNRNP48Q6IEG0 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
SNRNP48Q6IEG0 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SNRNP48Q6IEG0 ALDH1A3-203ENST00000557963 1670 ntBASIC26.13■■□□□ 1.77
SNRNP48Q6IEG0 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
SNRNP48Q6IEG0 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SNRNP48Q6IEG0 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC26.13■■□□□ 1.77
SNRNP48Q6IEG0 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC26.13■■□□□ 1.77
SNRNP48Q6IEG0 CA15P2-201ENST00000611168 834 ntBASIC26.13■■□□□ 1.77
SNRNP48Q6IEG0 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
SNRNP48Q6IEG0 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SNRNP48Q6IEG0 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SNRNP48Q6IEG0 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
SNRNP48Q6IEG0 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
SNRNP48Q6IEG0 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
SNRNP48Q6IEG0 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC26.12■■□□□ 1.77
SNRNP48Q6IEG0 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC26.12■■□□□ 1.77
SNRNP48Q6IEG0 HES6-206ENST00000409574 738 ntTSL 2 BASIC26.12■■□□□ 1.77
SNRNP48Q6IEG0 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
SNRNP48Q6IEG0 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC26.12■■□□□ 1.77
SNRNP48Q6IEG0 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC26.12■■□□□ 1.77
SNRNP48Q6IEG0 AC009086.3-201ENST00000623486 1008 ntBASIC26.12■■□□□ 1.77
SNRNP48Q6IEG0 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
SNRNP48Q6IEG0 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
SNRNP48Q6IEG0 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC26.12■■□□□ 1.77
SNRNP48Q6IEG0 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms