Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
HLA-DQA1Q5Y7H0 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
HLA-DQA1Q5Y7H0 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.21■□□□□ 0.99
HLA-DQA1Q5Y7H0 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HLA-DQA1Q5Y7H0 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.21■□□□□ 0.99
HLA-DQA1Q5Y7H0 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.21■□□□□ 0.99
HLA-DQA1Q5Y7H0 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HLA-DQA1Q5Y7H0 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HLA-DQA1Q5Y7H0 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.2■□□□□ 0.98
HLA-DQA1Q5Y7H0 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
HLA-DQA1Q5Y7H0 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HLA-DQA1Q5Y7H0 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
HLA-DQA1Q5Y7H0 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
HLA-DQA1Q5Y7H0 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
HLA-DQA1Q5Y7H0 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
HLA-DQA1Q5Y7H0 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.19■□□□□ 0.98
HLA-DQA1Q5Y7H0 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
HLA-DQA1Q5Y7H0 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
HLA-DQA1Q5Y7H0 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.19■□□□□ 0.98
HLA-DQA1Q5Y7H0 AL356441.2-201ENST00000443009 864 ntBASIC21.19■□□□□ 0.98
HLA-DQA1Q5Y7H0 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
HLA-DQA1Q5Y7H0 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
HLA-DQA1Q5Y7H0 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
HLA-DQA1Q5Y7H0 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.19■□□□□ 0.98
HLA-DQA1Q5Y7H0 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HLA-DQA1Q5Y7H0 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.18■□□□□ 0.98
HLA-DQA1Q5Y7H0 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HLA-DQA1Q5Y7H0 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HLA-DQA1Q5Y7H0 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.18■□□□□ 0.98
HLA-DQA1Q5Y7H0 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.18■□□□□ 0.98
HLA-DQA1Q5Y7H0 MIR6724-1-201ENST00000616420 92 ntBASIC21.18■□□□□ 0.98
HLA-DQA1Q5Y7H0 MIR6724-2-201ENST00000616483 92 ntBASIC21.18■□□□□ 0.98
HLA-DQA1Q5Y7H0 MIR6724-4-201ENST00000617390 92 ntBASIC21.18■□□□□ 0.98
HLA-DQA1Q5Y7H0 MIR6724-3-201ENST00000622482 92 ntBASIC21.18■□□□□ 0.98
HLA-DQA1Q5Y7H0 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.18■□□□□ 0.98
HLA-DQA1Q5Y7H0 AC005703.6-201ENST00000623265 1329 ntBASIC21.18■□□□□ 0.98
HLA-DQA1Q5Y7H0 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
HLA-DQA1Q5Y7H0 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.18■□□□□ 0.98
HLA-DQA1Q5Y7H0 ALDH1A3-203ENST00000557963 1670 ntBASIC21.18■□□□□ 0.98
HLA-DQA1Q5Y7H0 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.18■□□□□ 0.98
HLA-DQA1Q5Y7H0 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
HLA-DQA1Q5Y7H0 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
HLA-DQA1Q5Y7H0 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HLA-DQA1Q5Y7H0 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HLA-DQA1Q5Y7H0 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HLA-DQA1Q5Y7H0 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
HLA-DQA1Q5Y7H0 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.17■□□□□ 0.98
HLA-DQA1Q5Y7H0 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HLA-DQA1Q5Y7H0 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.17■□□□□ 0.98
HLA-DQA1Q5Y7H0 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
HLA-DQA1Q5Y7H0 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HLA-DQA1Q5Y7H0 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HLA-DQA1Q5Y7H0 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.16■□□□□ 0.98
HLA-DQA1Q5Y7H0 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HLA-DQA1Q5Y7H0 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.16■□□□□ 0.98
HLA-DQA1Q5Y7H0 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.16■□□□□ 0.98
HLA-DQA1Q5Y7H0 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.16■□□□□ 0.98
HLA-DQA1Q5Y7H0 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.16■□□□□ 0.98
HLA-DQA1Q5Y7H0 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HLA-DQA1Q5Y7H0 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HLA-DQA1Q5Y7H0 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HLA-DQA1Q5Y7H0 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.15■□□□□ 0.98
HLA-DQA1Q5Y7H0 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
HLA-DQA1Q5Y7H0 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
HLA-DQA1Q5Y7H0 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HLA-DQA1Q5Y7H0 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HLA-DQA1Q5Y7H0 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.15■□□□□ 0.98
HLA-DQA1Q5Y7H0 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.15■□□□□ 0.98
HLA-DQA1Q5Y7H0 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
HLA-DQA1Q5Y7H0 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
HLA-DQA1Q5Y7H0 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HLA-DQA1Q5Y7H0 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HLA-DQA1Q5Y7H0 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HLA-DQA1Q5Y7H0 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HLA-DQA1Q5Y7H0 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
HLA-DQA1Q5Y7H0 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.14■□□□□ 0.97
HLA-DQA1Q5Y7H0 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HLA-DQA1Q5Y7H0 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.97
HLA-DQA1Q5Y7H0 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
HLA-DQA1Q5Y7H0 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HLA-DQA1Q5Y7H0 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
HLA-DQA1Q5Y7H0 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.13■□□□□ 0.97
HLA-DQA1Q5Y7H0 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.13■□□□□ 0.97
HLA-DQA1Q5Y7H0 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HLA-DQA1Q5Y7H0 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.13■□□□□ 0.97
HLA-DQA1Q5Y7H0 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
HLA-DQA1Q5Y7H0 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
HLA-DQA1Q5Y7H0 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HLA-DQA1Q5Y7H0 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HLA-DQA1Q5Y7H0 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
HLA-DQA1Q5Y7H0 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
HLA-DQA1Q5Y7H0 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.12■□□□□ 0.97
HLA-DQA1Q5Y7H0 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.12■□□□□ 0.97
HLA-DQA1Q5Y7H0 AC004812.2-201ENST00000611079 2094 ntBASIC21.12■□□□□ 0.97
HLA-DQA1Q5Y7H0 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HLA-DQA1Q5Y7H0 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
HLA-DQA1Q5Y7H0 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.11■□□□□ 0.97
HLA-DQA1Q5Y7H0 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.11■□□□□ 0.97
HLA-DQA1Q5Y7H0 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.11■□□□□ 0.97
HLA-DQA1Q5Y7H0 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms