Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
VPS13DQ5THJ4 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
VPS13DQ5THJ4 AC099791.1-201ENST00000416440 715 ntBASIC15.58■□□□□ 0.08
VPS13DQ5THJ4 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC15.58■□□□□ 0.08
VPS13DQ5THJ4 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC15.58■□□□□ 0.08
VPS13DQ5THJ4 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC15.58■□□□□ 0.08
VPS13DQ5THJ4 NKILA-201ENST00000613231 537 ntTSL 4 BASIC15.58■□□□□ 0.08
VPS13DQ5THJ4 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC15.58■□□□□ 0.08
VPS13DQ5THJ4 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
VPS13DQ5THJ4 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC15.57■□□□□ 0.08
VPS13DQ5THJ4 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
VPS13DQ5THJ4 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VPS13DQ5THJ4 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
VPS13DQ5THJ4 KRT18P5-201ENST00000436075 1291 ntBASIC15.57■□□□□ 0.08
VPS13DQ5THJ4 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
VPS13DQ5THJ4 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC15.57■□□□□ 0.08
VPS13DQ5THJ4 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
VPS13DQ5THJ4 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VPS13DQ5THJ4 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
VPS13DQ5THJ4 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VPS13DQ5THJ4 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
VPS13DQ5THJ4 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VPS13DQ5THJ4 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VPS13DQ5THJ4 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC15.56■□□□□ 0.08
VPS13DQ5THJ4 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VPS13DQ5THJ4 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
VPS13DQ5THJ4 RAB43-208ENST00000615093 783 ntTSL 5 BASIC15.56■□□□□ 0.08
VPS13DQ5THJ4 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
VPS13DQ5THJ4 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC15.56■□□□□ 0.08
VPS13DQ5THJ4 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
VPS13DQ5THJ4 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
VPS13DQ5THJ4 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
VPS13DQ5THJ4 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
VPS13DQ5THJ4 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
VPS13DQ5THJ4 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VPS13DQ5THJ4 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
VPS13DQ5THJ4 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VPS13DQ5THJ4 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VPS13DQ5THJ4 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VPS13DQ5THJ4 ASB1-202ENST00000409297 878 ntTSL 5 BASIC15.55■□□□□ 0.08
VPS13DQ5THJ4 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VPS13DQ5THJ4 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VPS13DQ5THJ4 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
VPS13DQ5THJ4 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VPS13DQ5THJ4 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
VPS13DQ5THJ4 SLC47A1P1-202ENST00000449666 945 ntBASIC15.54■□□□□ 0.08
VPS13DQ5THJ4 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC15.54■□□□□ 0.08
VPS13DQ5THJ4 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
VPS13DQ5THJ4 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
VPS13DQ5THJ4 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC15.54■□□□□ 0.08
VPS13DQ5THJ4 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
VPS13DQ5THJ4 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
VPS13DQ5THJ4 DLX3-202ENST00000512495 834 ntTSL 2 BASIC15.54■□□□□ 0.08
VPS13DQ5THJ4 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
VPS13DQ5THJ4 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
VPS13DQ5THJ4 AC027612.3-201ENST00000413684 1047 ntBASIC15.54■□□□□ 0.08
VPS13DQ5THJ4 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
VPS13DQ5THJ4 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
VPS13DQ5THJ4 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC15.54■□□□□ 0.08
VPS13DQ5THJ4 STK32C-205ENST00000456004 607 ntTSL 2 BASIC15.54■□□□□ 0.08
VPS13DQ5THJ4 RAP2CP1-201ENST00000605103 478 ntBASIC15.54■□□□□ 0.08
VPS13DQ5THJ4 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
VPS13DQ5THJ4 GRAMD4P2-201ENST00000423297 1097 ntBASIC15.53■□□□□ 0.08
VPS13DQ5THJ4 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
VPS13DQ5THJ4 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC15.53■□□□□ 0.08
VPS13DQ5THJ4 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC15.53■□□□□ 0.08
VPS13DQ5THJ4 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
VPS13DQ5THJ4 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
VPS13DQ5THJ4 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
VPS13DQ5THJ4 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC15.53■□□□□ 0.08
VPS13DQ5THJ4 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC15.53■□□□□ 0.08
VPS13DQ5THJ4 BX842568.3-201ENST00000418104 571 ntBASIC15.53■□□□□ 0.08
VPS13DQ5THJ4 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC15.53■□□□□ 0.08
VPS13DQ5THJ4 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
VPS13DQ5THJ4 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
VPS13DQ5THJ4 VGF-203ENST00000611537 1622 ntTSL 5 BASIC15.53■□□□□ 0.08
VPS13DQ5THJ4 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
VPS13DQ5THJ4 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
VPS13DQ5THJ4 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
VPS13DQ5THJ4 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
VPS13DQ5THJ4 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
VPS13DQ5THJ4 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC15.52■□□□□ 0.08
VPS13DQ5THJ4 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
VPS13DQ5THJ4 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
VPS13DQ5THJ4 USF2-207ENST00000595068 1612 ntTSL 5 BASIC15.52■□□□□ 0.08
VPS13DQ5THJ4 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
VPS13DQ5THJ4 ME3-201ENST00000323418 1068 ntTSL 5 BASIC15.52■□□□□ 0.07
VPS13DQ5THJ4 TERF1P2-201ENST00000583350 1212 ntBASIC15.52■□□□□ 0.07
VPS13DQ5THJ4 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC15.52■□□□□ 0.07
VPS13DQ5THJ4 MIR6089-201ENST00000616698 64 ntBASIC15.52■□□□□ 0.07
VPS13DQ5THJ4 AL358852.1-201ENST00000623174 1268 ntBASIC15.52■□□□□ 0.07
VPS13DQ5THJ4 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
VPS13DQ5THJ4 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC15.52■□□□□ 0.07
VPS13DQ5THJ4 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
VPS13DQ5THJ4 HLA-L-209ENST00000420110 1011 ntBASIC15.52■□□□□ 0.07
VPS13DQ5THJ4 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC15.52■□□□□ 0.07
VPS13DQ5THJ4 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC15.52■□□□□ 0.07
VPS13DQ5THJ4 MPST-208ENST00000628507 698 ntTSL 5 BASIC15.52■□□□□ 0.07
VPS13DQ5THJ4 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
VPS13DQ5THJ4 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms