Protein–RNA interactions for Protein: Q53EL6

PDCD4, Programmed cell death protein 4, humanhuman

Known RBP Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4Q53EL6 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
PDCD4Q53EL6 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PDCD4Q53EL6 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
PDCD4Q53EL6 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.87■■□□□ 1.09
PDCD4Q53EL6 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
PDCD4Q53EL6 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.87■■□□□ 1.09
PDCD4Q53EL6 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC21.87■■□□□ 1.09
PDCD4Q53EL6 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC21.87■■□□□ 1.09
PDCD4Q53EL6 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PDCD4Q53EL6 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
PDCD4Q53EL6 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.87■■□□□ 1.09
PDCD4Q53EL6 AL024507.2-201ENST00000606070 2574 ntBASIC21.87■■□□□ 1.09
PDCD4Q53EL6 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PDCD4Q53EL6 MIR6765-201ENST00000614092 87 ntBASIC21.86■■□□□ 1.09
PDCD4Q53EL6 AL022069.1-201ENST00000568025 1636 ntBASIC21.86■■□□□ 1.09
PDCD4Q53EL6 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PDCD4Q53EL6 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PDCD4Q53EL6 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PDCD4Q53EL6 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.86■■□□□ 1.09
PDCD4Q53EL6 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PDCD4Q53EL6 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
PDCD4Q53EL6 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PDCD4Q53EL6 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PDCD4Q53EL6 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC21.85■■□□□ 1.09
PDCD4Q53EL6 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.85■■□□□ 1.09
PDCD4Q53EL6 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
PDCD4Q53EL6 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
PDCD4Q53EL6 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PDCD4Q53EL6 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PDCD4Q53EL6 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
PDCD4Q53EL6 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PDCD4Q53EL6 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
PDCD4Q53EL6 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC21.84■■□□□ 1.09
PDCD4Q53EL6 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.84■■□□□ 1.09
PDCD4Q53EL6 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PDCD4Q53EL6 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PDCD4Q53EL6 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PDCD4Q53EL6 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.84■■□□□ 1.09
PDCD4Q53EL6 AC233723.2-201ENST00000623798 2106 ntBASIC21.83■■□□□ 1.09
PDCD4Q53EL6 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PDCD4Q53EL6 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PDCD4Q53EL6 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PDCD4Q53EL6 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PDCD4Q53EL6 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.83■■□□□ 1.09
PDCD4Q53EL6 DUX4L9-201ENST00000449051 1259 ntBASIC21.83■■□□□ 1.09
PDCD4Q53EL6 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PDCD4Q53EL6 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PDCD4Q53EL6 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
PDCD4Q53EL6 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
PDCD4Q53EL6 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.82■■□□□ 1.08
PDCD4Q53EL6 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
PDCD4Q53EL6 LONRF2P2-201ENST00000439212 571 ntBASIC21.82■■□□□ 1.08
PDCD4Q53EL6 ABHD17AP3-201ENST00000503096 1137 ntBASIC21.82■■□□□ 1.08
PDCD4Q53EL6 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC21.82■■□□□ 1.08
PDCD4Q53EL6 HYI-213ENST00000583037 1322 ntTSL 5 BASIC21.81■■□□□ 1.08
PDCD4Q53EL6 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PDCD4Q53EL6 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PDCD4Q53EL6 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PDCD4Q53EL6 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
PDCD4Q53EL6 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PDCD4Q53EL6 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PDCD4Q53EL6 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PDCD4Q53EL6 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
PDCD4Q53EL6 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PDCD4Q53EL6 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
PDCD4Q53EL6 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PDCD4Q53EL6 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
PDCD4Q53EL6 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PDCD4Q53EL6 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
PDCD4Q53EL6 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
PDCD4Q53EL6 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.79■■□□□ 1.08
PDCD4Q53EL6 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PDCD4Q53EL6 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PDCD4Q53EL6 AC011551.1-201ENST00000614101 683 ntBASIC21.79■■□□□ 1.08
PDCD4Q53EL6 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PDCD4Q53EL6 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.79■■□□□ 1.08
PDCD4Q53EL6 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PDCD4Q53EL6 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.78■■□□□ 1.08
PDCD4Q53EL6 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PDCD4Q53EL6 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
PDCD4Q53EL6 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC21.78■■□□□ 1.08
PDCD4Q53EL6 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.78■■□□□ 1.08
PDCD4Q53EL6 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.78■■□□□ 1.08
PDCD4Q53EL6 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.78■■□□□ 1.08
PDCD4Q53EL6 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.78■■□□□ 1.08
PDCD4Q53EL6 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PDCD4Q53EL6 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PDCD4Q53EL6 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PDCD4Q53EL6 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.77■■□□□ 1.08
PDCD4Q53EL6 AC131274.2-201ENST00000580697 1507 ntBASIC21.77■■□□□ 1.08
PDCD4Q53EL6 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
PDCD4Q53EL6 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.77■■□□□ 1.08
PDCD4Q53EL6 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
PDCD4Q53EL6 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.77■■□□□ 1.08
PDCD4Q53EL6 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PDCD4Q53EL6 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC21.77■■□□□ 1.08
PDCD4Q53EL6 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PDCD4Q53EL6 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PDCD4Q53EL6 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
PDCD4Q53EL6 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms