Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
USH1GQ495M9 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
USH1GQ495M9 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
USH1GQ495M9 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC26.27■■□□□ 1.8
USH1GQ495M9 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
USH1GQ495M9 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC26.26■■□□□ 1.79
USH1GQ495M9 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
USH1GQ495M9 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC26.26■■□□□ 1.79
USH1GQ495M9 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC26.26■■□□□ 1.79
USH1GQ495M9 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC26.26■■□□□ 1.79
USH1GQ495M9 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
USH1GQ495M9 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
USH1GQ495M9 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
USH1GQ495M9 GATM-206ENST00000558336 1522 ntTSL 2 BASIC26.25■■□□□ 1.79
USH1GQ495M9 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
USH1GQ495M9 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
USH1GQ495M9 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
USH1GQ495M9 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC26.25■■□□□ 1.79
USH1GQ495M9 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
USH1GQ495M9 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
USH1GQ495M9 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
USH1GQ495M9 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
USH1GQ495M9 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
USH1GQ495M9 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC26.24■■□□□ 1.79
USH1GQ495M9 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
USH1GQ495M9 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC26.24■■□□□ 1.79
USH1GQ495M9 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC26.24■■□□□ 1.79
USH1GQ495M9 ALDH1A3-203ENST00000557963 1670 ntBASIC26.24■■□□□ 1.79
USH1GQ495M9 USF2-207ENST00000595068 1612 ntTSL 5 BASIC26.24■■□□□ 1.79
USH1GQ495M9 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
USH1GQ495M9 AC009102.2-201ENST00000606772 1639 ntBASIC26.23■■□□□ 1.79
USH1GQ495M9 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
USH1GQ495M9 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC26.22■■□□□ 1.79
USH1GQ495M9 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
USH1GQ495M9 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
USH1GQ495M9 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
USH1GQ495M9 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
USH1GQ495M9 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
USH1GQ495M9 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
USH1GQ495M9 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
USH1GQ495M9 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
USH1GQ495M9 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
USH1GQ495M9 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
USH1GQ495M9 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
USH1GQ495M9 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
USH1GQ495M9 UNC93B3-201ENST00000308076 687 ntBASIC26.2■■□□□ 1.78
USH1GQ495M9 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
USH1GQ495M9 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
USH1GQ495M9 EI24-204ENST00000527235 1625 ntTSL 5 BASIC26.2■■□□□ 1.78
USH1GQ495M9 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
USH1GQ495M9 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
USH1GQ495M9 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
USH1GQ495M9 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
USH1GQ495M9 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
USH1GQ495M9 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
USH1GQ495M9 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
USH1GQ495M9 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC26.19■■□□□ 1.78
USH1GQ495M9 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC26.19■■□□□ 1.78
USH1GQ495M9 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC26.19■■□□□ 1.78
USH1GQ495M9 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
USH1GQ495M9 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC26.19■■□□□ 1.78
USH1GQ495M9 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
USH1GQ495M9 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
USH1GQ495M9 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
USH1GQ495M9 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC26.19■■□□□ 1.78
USH1GQ495M9 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
USH1GQ495M9 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
USH1GQ495M9 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
USH1GQ495M9 EED-207ENST00000528180 1745 ntTSL 5 BASIC26.18■■□□□ 1.78
USH1GQ495M9 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC26.18■■□□□ 1.78
USH1GQ495M9 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC26.18■■□□□ 1.78
USH1GQ495M9 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
USH1GQ495M9 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
USH1GQ495M9 PBX2P1-201ENST00000493219 1291 ntBASIC26.17■■□□□ 1.78
USH1GQ495M9 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
USH1GQ495M9 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
USH1GQ495M9 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
USH1GQ495M9 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
USH1GQ495M9 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
USH1GQ495M9 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
USH1GQ495M9 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC26.16■■□□□ 1.78
USH1GQ495M9 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC26.16■■□□□ 1.78
USH1GQ495M9 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC26.16■■□□□ 1.78
USH1GQ495M9 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC26.15■■□□□ 1.78
USH1GQ495M9 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC26.15■■□□□ 1.78
USH1GQ495M9 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC26.15■■□□□ 1.78
USH1GQ495M9 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
USH1GQ495M9 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
USH1GQ495M9 AL136162.1-201ENST00000607711 1078 ntBASIC26.15■■□□□ 1.78
USH1GQ495M9 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
USH1GQ495M9 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
USH1GQ495M9 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
USH1GQ495M9 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.78
USH1GQ495M9 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC26.14■■□□□ 1.78
USH1GQ495M9 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC26.14■■□□□ 1.78
USH1GQ495M9 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC26.14■■□□□ 1.78
USH1GQ495M9 LINC01124-201ENST00000409786 2117 ntBASIC26.14■■□□□ 1.77
USH1GQ495M9 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
USH1GQ495M9 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC26.14■■□□□ 1.77
USH1GQ495M9 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms