Protein–RNA interactions for Protein: Q495D7

LINC01559, Putative uncharacterized protein encoded by LINC01559, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01559Q495D7 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
LINC01559Q495D7 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LINC01559Q495D7 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LINC01559Q495D7 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LINC01559Q495D7 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC16.89■□□□□ 0.3
LINC01559Q495D7 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LINC01559Q495D7 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
LINC01559Q495D7 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC16.89■□□□□ 0.29
LINC01559Q495D7 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC16.89■□□□□ 0.29
LINC01559Q495D7 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LINC01559Q495D7 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LINC01559Q495D7 AC090877.2-201ENST00000558441 1738 ntBASIC16.89■□□□□ 0.29
LINC01559Q495D7 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
LINC01559Q495D7 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LINC01559Q495D7 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC16.89■□□□□ 0.29
LINC01559Q495D7 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LINC01559Q495D7 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
LINC01559Q495D7 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LINC01559Q495D7 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LINC01559Q495D7 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LINC01559Q495D7 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LINC01559Q495D7 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LINC01559Q495D7 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC16.88■□□□□ 0.29
LINC01559Q495D7 SRP68-213ENST00000629930 165 ntTSL 5 BASIC16.88■□□□□ 0.29
LINC01559Q495D7 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC16.88■□□□□ 0.29
LINC01559Q495D7 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC16.88■□□□□ 0.29
LINC01559Q495D7 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
LINC01559Q495D7 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC16.87■□□□□ 0.29
LINC01559Q495D7 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LINC01559Q495D7 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC16.87■□□□□ 0.29
LINC01559Q495D7 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
LINC01559Q495D7 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC16.87■□□□□ 0.29
LINC01559Q495D7 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC16.87■□□□□ 0.29
LINC01559Q495D7 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LINC01559Q495D7 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LINC01559Q495D7 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LINC01559Q495D7 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LINC01559Q495D7 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LINC01559Q495D7 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
LINC01559Q495D7 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LINC01559Q495D7 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
LINC01559Q495D7 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC16.87■□□□□ 0.29
LINC01559Q495D7 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LINC01559Q495D7 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
LINC01559Q495D7 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LINC01559Q495D7 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LINC01559Q495D7 C1orf229-201ENST00000623686 2258 ntBASIC16.86■□□□□ 0.29
LINC01559Q495D7 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LINC01559Q495D7 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LINC01559Q495D7 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC16.86■□□□□ 0.29
LINC01559Q495D7 EP400NL-214ENST00000641289 2402 ntBASIC16.86■□□□□ 0.29
LINC01559Q495D7 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LINC01559Q495D7 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
LINC01559Q495D7 IFNA4-201ENST00000421715 978 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
LINC01559Q495D7 HES4-204ENST00000484667 667 ntTSL 3 BASIC16.86■□□□□ 0.29
LINC01559Q495D7 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
LINC01559Q495D7 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC16.86■□□□□ 0.29
LINC01559Q495D7 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LINC01559Q495D7 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
LINC01559Q495D7 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC16.86■□□□□ 0.29
LINC01559Q495D7 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LINC01559Q495D7 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC16.86■□□□□ 0.29
LINC01559Q495D7 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
LINC01559Q495D7 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LINC01559Q495D7 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC16.86■□□□□ 0.29
LINC01559Q495D7 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
LINC01559Q495D7 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LINC01559Q495D7 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
LINC01559Q495D7 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LINC01559Q495D7 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LINC01559Q495D7 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LINC01559Q495D7 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LINC01559Q495D7 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
LINC01559Q495D7 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
LINC01559Q495D7 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LINC01559Q495D7 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC16.85■□□□□ 0.29
LINC01559Q495D7 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LINC01559Q495D7 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LINC01559Q495D7 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LINC01559Q495D7 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
LINC01559Q495D7 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
LINC01559Q495D7 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LINC01559Q495D7 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
LINC01559Q495D7 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC16.85■□□□□ 0.29
LINC01559Q495D7 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC16.85■□□□□ 0.29
LINC01559Q495D7 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC16.84■□□□□ 0.29
LINC01559Q495D7 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
LINC01559Q495D7 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LINC01559Q495D7 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LINC01559Q495D7 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC16.84■□□□□ 0.29
LINC01559Q495D7 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
LINC01559Q495D7 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
LINC01559Q495D7 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC16.84■□□□□ 0.29
LINC01559Q495D7 CEP120-209ENST00000515110 606 ntTSL 3 BASIC16.84■□□□□ 0.29
LINC01559Q495D7 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC16.84■□□□□ 0.29
LINC01559Q495D7 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LINC01559Q495D7 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC16.84■□□□□ 0.29
LINC01559Q495D7 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LINC01559Q495D7 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LINC01559Q495D7 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms