Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
EFNB3Q15768 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
EFNB3Q15768 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
EFNB3Q15768 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
EFNB3Q15768 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
EFNB3Q15768 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
EFNB3Q15768 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
EFNB3Q15768 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
EFNB3Q15768 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
EFNB3Q15768 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
EFNB3Q15768 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
EFNB3Q15768 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
EFNB3Q15768 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
EFNB3Q15768 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
EFNB3Q15768 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
EFNB3Q15768 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
EFNB3Q15768 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
EFNB3Q15768 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
EFNB3Q15768 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
EFNB3Q15768 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.46■□□□□ 0.71
EFNB3Q15768 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
EFNB3Q15768 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
EFNB3Q15768 AC133561.4-201ENST00000566112 224 ntBASIC19.46■□□□□ 0.71
EFNB3Q15768 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.46■□□□□ 0.71
EFNB3Q15768 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
EFNB3Q15768 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
EFNB3Q15768 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.45■□□□□ 0.7
EFNB3Q15768 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.45■□□□□ 0.7
EFNB3Q15768 AC092171.4-201ENST00000609130 632 ntBASIC19.45■□□□□ 0.7
EFNB3Q15768 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.45■□□□□ 0.7
EFNB3Q15768 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
EFNB3Q15768 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
EFNB3Q15768 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
EFNB3Q15768 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
EFNB3Q15768 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.44■□□□□ 0.7
EFNB3Q15768 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
EFNB3Q15768 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC19.44■□□□□ 0.7
EFNB3Q15768 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.44■□□□□ 0.7
EFNB3Q15768 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
EFNB3Q15768 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
EFNB3Q15768 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
EFNB3Q15768 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
EFNB3Q15768 DUX4L19-201ENST00000557448 1267 ntBASIC19.44■□□□□ 0.7
EFNB3Q15768 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.44■□□□□ 0.7
EFNB3Q15768 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
EFNB3Q15768 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC19.44■□□□□ 0.7
EFNB3Q15768 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
EFNB3Q15768 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
EFNB3Q15768 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
EFNB3Q15768 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
EFNB3Q15768 ALDH1A3-203ENST00000557963 1670 ntBASIC19.43■□□□□ 0.7
EFNB3Q15768 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
EFNB3Q15768 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
EFNB3Q15768 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.43■□□□□ 0.7
EFNB3Q15768 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
EFNB3Q15768 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.43■□□□□ 0.7
EFNB3Q15768 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
EFNB3Q15768 AC009102.2-201ENST00000606772 1639 ntBASIC19.43■□□□□ 0.7
EFNB3Q15768 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
EFNB3Q15768 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
EFNB3Q15768 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
EFNB3Q15768 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
EFNB3Q15768 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.42■□□□□ 0.7
EFNB3Q15768 AC138932.3-201ENST00000567634 1902 ntBASIC19.42■□□□□ 0.7
EFNB3Q15768 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
EFNB3Q15768 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.42■□□□□ 0.7
EFNB3Q15768 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
EFNB3Q15768 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
EFNB3Q15768 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
EFNB3Q15768 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
EFNB3Q15768 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.41■□□□□ 0.7
EFNB3Q15768 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
EFNB3Q15768 AC106739.1-201ENST00000617035 715 ntBASIC19.41■□□□□ 0.7
EFNB3Q15768 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
EFNB3Q15768 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.41■□□□□ 0.7
EFNB3Q15768 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
EFNB3Q15768 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
EFNB3Q15768 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.4■□□□□ 0.7
EFNB3Q15768 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.4■□□□□ 0.7
EFNB3Q15768 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
EFNB3Q15768 UNC93B3-201ENST00000308076 687 ntBASIC19.4■□□□□ 0.7
EFNB3Q15768 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.4■□□□□ 0.7
EFNB3Q15768 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
EFNB3Q15768 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
EFNB3Q15768 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
EFNB3Q15768 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.39■□□□□ 0.7
EFNB3Q15768 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
EFNB3Q15768 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC19.39■□□□□ 0.69
EFNB3Q15768 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
EFNB3Q15768 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
EFNB3Q15768 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
EFNB3Q15768 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
EFNB3Q15768 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
EFNB3Q15768 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.39■□□□□ 0.69
EFNB3Q15768 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
EFNB3Q15768 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.39■□□□□ 0.69
EFNB3Q15768 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.39■□□□□ 0.69
EFNB3Q15768 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
EFNB3Q15768 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
EFNB3Q15768 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms