Protein–RNA interactions for Protein: Q08109

HRD1, ERAD-associated E3 ubiquitin-protein ligase HRD1, yeastyeast

Predictions only

Length 551 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HRD1Q08109 SIS2YKR072C 1689 nt4.04□□□□□ -1.76
HRD1Q08109 NDC1YML031W 1968 nt4.04□□□□□ -1.76
HRD1Q08109 SBE2YDR351W 2595 nt4.04□□□□□ -1.76
HRD1Q08109 CRT10YOL063C 2874 nt4.04□□□□□ -1.76
HRD1Q08109 YDR134CYDR134C 411 nt4.04□□□□□ -1.76
HRD1Q08109 YMR085WYMR085W 1299 nt4.04□□□□□ -1.76
HRD1Q08109 TRS33YOR115C 807 nt4.04□□□□□ -1.76
HRD1Q08109 HXT4YHR092C 1731 nt4.04□□□□□ -1.76
HRD1Q08109 YHL034W-AYHL034W-A 462 nt4.03□□□□□ -1.76
HRD1Q08109 YKL023WYKL023W 834 nt4.03□□□□□ -1.76
HRD1Q08109 YAL044W-AYAL044W-A 333 nt4.03□□□□□ -1.76
HRD1Q08109 MID2YLR332W 1131 nt4.03□□□□□ -1.76
HRD1Q08109 MAK3YPR051W 531 nt4.03□□□□□ -1.76
HRD1Q08109 NHP6AYPR052C 282 nt4.03□□□□□ -1.76
HRD1Q08109 RKM2YDR198C 1440 nt4.03□□□□□ -1.76
HRD1Q08109 KDX1YKL161C 1302 nt4.02□□□□□ -1.77
HRD1Q08109 STB2YMR053C 2553 nt4.02□□□□□ -1.77
HRD1Q08109 SCM3YDL139C 672 nt4.02□□□□□ -1.77
HRD1Q08109 RDL1YOR285W 420 nt4.02□□□□□ -1.77
HRD1Q08109 BBP1YPL255W 1158 nt4.02□□□□□ -1.77
HRD1Q08109 TOM5YPR133W-A 153 nt4.02□□□□□ -1.77
HRD1Q08109 THS1YIL078W 2205 nt4.02□□□□□ -1.77
HRD1Q08109 PFK1YGR240C 2964 nt4.02□□□□□ -1.77
HRD1Q08109 HOM3YER052C 1584 nt4.02□□□□□ -1.77
HRD1Q08109 KAR2YJL034W 2049 nt4.01□□□□□ -1.77
HRD1Q08109 AIR2YDL175C 1035 nt4.01□□□□□ -1.77
HRD1Q08109 MNN10YDR245W 1182 nt4.01□□□□□ -1.77
HRD1Q08109 YER133W-AYER133W-A 342 nt4.01□□□□□ -1.77
HRD1Q08109 RPN12YFR052W 825 nt4.01□□□□□ -1.77
HRD1Q08109 IRC7YFR055W 1023 nt4.01□□□□□ -1.77
HRD1Q08109 DAM1YGR113W 1032 nt4.01□□□□□ -1.77
HRD1Q08109 YHR095WYHR095W 495 nt4.01□□□□□ -1.77
HRD1Q08109 RPL43BYJR094W-A 279 nt4.01□□□□□ -1.77
HRD1Q08109 BUD28YLR062C 378 nt4.01□□□□□ -1.77
HRD1Q08109 CUZ1YNL155W 825 nt4.01□□□□□ -1.77
HRD1Q08109 YNL174WYNL174W 573 nt4.01□□□□□ -1.77
HRD1Q08109 CKB2YOR039W 777 nt4.01□□□□□ -1.77
HRD1Q08109 CUE5YOR042W 1236 nt4.01□□□□□ -1.77
HRD1Q08109 YCL022CYCL022C 516 nt4.01□□□□□ -1.77
HRD1Q08109 APC1YNL172W 5247 nt4.01□□□□□ -1.77
HRD1Q08109 MNT2YGL257C 1677 nt4□□□□□ -1.77
HRD1Q08109 HSP82YPL240C 2130 nt4□□□□□ -1.77
HRD1Q08109 MKS1YNL076W 1755 nt4□□□□□ -1.77
HRD1Q08109 VID22YLR373C 2706 nt4□□□□□ -1.77
HRD1Q08109 FAU1YER183C 636 nt4□□□□□ -1.77
HRD1Q08109 BGL2YGR282C 942 nt4□□□□□ -1.77
HRD1Q08109 GAT4YIR013C 366 nt4□□□□□ -1.77
HRD1Q08109 GSP2YOR185C 663 nt4□□□□□ -1.77
HRD1Q08109 HXT7YDR342C 1713 nt4□□□□□ -1.77
HRD1Q08109 HXT6YDR343C 1713 nt4□□□□□ -1.77
HRD1Q08109 RRN11YML043C 1524 nt4□□□□□ -1.77
HRD1Q08109 PMT5YDL093W 2232 nt3.99□□□□□ -1.77
HRD1Q08109 COT1YOR316C 1320 nt3.99□□□□□ -1.77
HRD1Q08109 GCV1YDR019C 1203 nt3.99□□□□□ -1.77
HRD1Q08109 COQ4YDR204W 1008 nt3.99□□□□□ -1.77
HRD1Q08109 DCV1YFR012W 609 nt3.99□□□□□ -1.77
HRD1Q08109 YGR153WYGR153W 654 nt3.99□□□□□ -1.77
HRD1Q08109 DAL3YIR032C 588 nt3.99□□□□□ -1.77
HRD1Q08109 TOM7YNL070W 183 nt3.99□□□□□ -1.77
HRD1Q08109 MDG1YNL173C 1101 nt3.99□□□□□ -1.77
HRD1Q08109 SER1YOR184W 1188 nt3.99□□□□□ -1.77
HRD1Q08109 FRS1YLR060W 1788 nt3.99□□□□□ -1.77
HRD1Q08109 SKG6YHR149C 2205 nt3.98□□□□□ -1.77
HRD1Q08109 YEL045CYEL045C 426 nt3.98□□□□□ -1.77
HRD1Q08109 NOP16YER002W 696 nt3.98□□□□□ -1.77
HRD1Q08109 YFL064CYFL064C 525 nt3.98□□□□□ -1.77
HRD1Q08109 PRE7YBL041W 726 nt3.98□□□□□ -1.77
HRD1Q08109 SPS18YNL204C 903 nt3.98□□□□□ -1.77
HRD1Q08109 NME1NME1 340 nt3.98□□□□□ -1.77
HRD1Q08109 YPR202WYPR202W 717 nt3.98□□□□□ -1.77
HRD1Q08109 HRR25YPL204W 1485 nt3.98□□□□□ -1.77
HRD1Q08109 MPS3YJL019W 2049 nt3.97□□□□□ -1.77
HRD1Q08109 ECM32YER176W 3366 nt3.97□□□□□ -1.77
HRD1Q08109 ORM1YGR038W 669 nt3.97□□□□□ -1.77
HRD1Q08109 FAF1YIL019W 1041 nt3.97□□□□□ -1.77
HRD1Q08109 YML057C-AYML057C-A 390 nt3.97□□□□□ -1.77
HRD1Q08109 YPR109WYPR109W 885 nt3.97□□□□□ -1.77
HRD1Q08109 SKG3YLR187W 3081 nt3.97□□□□□ -1.77
HRD1Q08109 PUT1YLR142W 1431 nt3.96□□□□□ -1.77
HRD1Q08109 RRP3YHR065C 1506 nt3.96□□□□□ -1.78
HRD1Q08109 TRE1YPL176C 2352 nt3.96□□□□□ -1.78
HRD1Q08109 TDA5YLR426W 981 nt3.96□□□□□ -1.78
HRD1Q08109 YPL245WYPL245W 1365 nt3.96□□□□□ -1.78
HRD1Q08109 SEN1YLR430W 6696 nt3.96□□□□□ -1.78
HRD1Q08109 SDA1YGR245C 2304 nt3.95□□□□□ -1.78
HRD1Q08109 RPL8AYHL033C 771 nt3.95□□□□□ -1.78
HRD1Q08109 YCL041CYCL041C 495 nt3.95□□□□□ -1.78
HRD1Q08109 SER33YIL074C 1410 nt3.95□□□□□ -1.78
HRD1Q08109 MTC1YJL123C 1437 nt3.95□□□□□ -1.78
HRD1Q08109 YSH1YLR277C 2340 nt3.94□□□□□ -1.78
HRD1Q08109 RVB1YDR190C 1392 nt3.94□□□□□ -1.78
HRD1Q08109 ADK2YER170W 678 nt3.94□□□□□ -1.78
HRD1Q08109 ATP14YLR295C 375 nt3.94□□□□□ -1.78
HRD1Q08109 YMR315WYMR315W 1050 nt3.94□□□□□ -1.78
HRD1Q08109 DCS2YOR173W 1062 nt3.94□□□□□ -1.78
HRD1Q08109 YPL199CYPL199C 723 nt3.94□□□□□ -1.78
HRD1Q08109 BOP2YLR267W 1713 nt3.94□□□□□ -1.78
HRD1Q08109 PRM7YDL039C 2097 nt3.94□□□□□ -1.78
HRD1Q08109 YBR139WYBR139W 1527 nt3.94□□□□□ -1.78
HRD1Q08109 NUG1YER006W 1563 nt3.93□□□□□ -1.78
Retrieved 100 of 7,029 protein–RNA pairs in 16.5 ms