Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
NKX6-1P78426 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NKX6-1P78426 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NKX6-1P78426 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NKX6-1P78426 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NKX6-1P78426 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
NKX6-1P78426 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NKX6-1P78426 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
NKX6-1P78426 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NKX6-1P78426 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
NKX6-1P78426 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.94■□□□□ 0.78
NKX6-1P78426 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
NKX6-1P78426 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.94■□□□□ 0.78
NKX6-1P78426 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.94■□□□□ 0.78
NKX6-1P78426 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.94■□□□□ 0.78
NKX6-1P78426 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.94■□□□□ 0.78
NKX6-1P78426 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NKX6-1P78426 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NKX6-1P78426 AC093323.1-202ENST00000635031 2045 ntBASIC19.93■□□□□ 0.78
NKX6-1P78426 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
NKX6-1P78426 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.93■□□□□ 0.78
NKX6-1P78426 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.93■□□□□ 0.78
NKX6-1P78426 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
NKX6-1P78426 SNX5-217ENST00000606557 1087 ntBASIC19.93■□□□□ 0.78
NKX6-1P78426 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC19.93■□□□□ 0.78
NKX6-1P78426 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NKX6-1P78426 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NKX6-1P78426 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NKX6-1P78426 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
NKX6-1P78426 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NKX6-1P78426 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NKX6-1P78426 UNC93B3-201ENST00000308076 687 ntBASIC19.92■□□□□ 0.78
NKX6-1P78426 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NKX6-1P78426 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NKX6-1P78426 AC104564.3-201ENST00000582367 638 ntBASIC19.92■□□□□ 0.78
NKX6-1P78426 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.92■□□□□ 0.78
NKX6-1P78426 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.92■□□□□ 0.78
NKX6-1P78426 AC020928.2-201ENST00000588717 2197 ntBASIC19.92■□□□□ 0.78
NKX6-1P78426 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NKX6-1P78426 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.92■□□□□ 0.78
NKX6-1P78426 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NKX6-1P78426 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.91■□□□□ 0.78
NKX6-1P78426 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NKX6-1P78426 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
NKX6-1P78426 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NKX6-1P78426 AC026271.2-201ENST00000428091 497 ntBASIC19.91■□□□□ 0.78
NKX6-1P78426 MIR5787-201ENST00000611784 55 ntBASIC19.91■□□□□ 0.78
NKX6-1P78426 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NKX6-1P78426 AC135279.3-201ENST00000610945 1311 ntBASIC19.91■□□□□ 0.78
NKX6-1P78426 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
NKX6-1P78426 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NKX6-1P78426 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NKX6-1P78426 AC142381.3-201ENST00000568208 1670 ntBASIC19.91■□□□□ 0.78
NKX6-1P78426 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NKX6-1P78426 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NKX6-1P78426 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.9■□□□□ 0.78
NKX6-1P78426 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NKX6-1P78426 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.9■□□□□ 0.78
NKX6-1P78426 AP003733.4-201ENST00000623785 1697 ntBASIC19.9■□□□□ 0.78
NKX6-1P78426 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NKX6-1P78426 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NKX6-1P78426 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NKX6-1P78426 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.89■□□□□ 0.77
NKX6-1P78426 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.89■□□□□ 0.77
NKX6-1P78426 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.89■□□□□ 0.77
NKX6-1P78426 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NKX6-1P78426 AL136162.1-201ENST00000607711 1078 ntBASIC19.89■□□□□ 0.77
NKX6-1P78426 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.89■□□□□ 0.77
NKX6-1P78426 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.89■□□□□ 0.77
NKX6-1P78426 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.89■□□□□ 0.77
NKX6-1P78426 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.89■□□□□ 0.77
NKX6-1P78426 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.89■□□□□ 0.77
NKX6-1P78426 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NKX6-1P78426 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NKX6-1P78426 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
NKX6-1P78426 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
NKX6-1P78426 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NKX6-1P78426 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.88■□□□□ 0.77
NKX6-1P78426 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NKX6-1P78426 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
NKX6-1P78426 AC131274.2-201ENST00000580697 1507 ntBASIC19.88■□□□□ 0.77
NKX6-1P78426 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
NKX6-1P78426 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
NKX6-1P78426 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NKX6-1P78426 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NKX6-1P78426 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.88■□□□□ 0.77
NKX6-1P78426 AC004448.1-201ENST00000458332 883 ntBASIC19.88■□□□□ 0.77
NKX6-1P78426 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NKX6-1P78426 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.88■□□□□ 0.77
NKX6-1P78426 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NKX6-1P78426 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC19.88■□□□□ 0.77
NKX6-1P78426 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
NKX6-1P78426 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
NKX6-1P78426 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NKX6-1P78426 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NKX6-1P78426 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC19.87■□□□□ 0.77
NKX6-1P78426 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NKX6-1P78426 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NKX6-1P78426 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.87■□□□□ 0.77
NKX6-1P78426 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms