Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CXCR4P61073 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CXCR4P61073 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.79■□□□□ 0.92
CXCR4P61073 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.79■□□□□ 0.92
CXCR4P61073 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CXCR4P61073 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CXCR4P61073 AC007375.3-201ENST00000600936 2314 ntBASIC20.78■□□□□ 0.92
CXCR4P61073 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CXCR4P61073 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CXCR4P61073 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CXCR4P61073 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CXCR4P61073 RP9P-202ENST00000450133 1212 ntBASIC20.78■□□□□ 0.92
CXCR4P61073 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.78■□□□□ 0.92
CXCR4P61073 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CXCR4P61073 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CXCR4P61073 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CXCR4P61073 ECEL1P2-201ENST00000461596 1295 ntBASIC20.77■□□□□ 0.92
CXCR4P61073 MIR7108-201ENST00000614319 87 ntBASIC20.77■□□□□ 0.92
CXCR4P61073 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CXCR4P61073 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CXCR4P61073 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CXCR4P61073 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CXCR4P61073 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CXCR4P61073 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
CXCR4P61073 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CXCR4P61073 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CXCR4P61073 AC242852.2-201ENST00000615738 1807 ntBASIC20.76■□□□□ 0.91
CXCR4P61073 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CXCR4P61073 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.76■□□□□ 0.91
CXCR4P61073 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.76■□□□□ 0.91
CXCR4P61073 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CXCR4P61073 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
CXCR4P61073 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CXCR4P61073 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CXCR4P61073 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CXCR4P61073 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CXCR4P61073 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CXCR4P61073 AC093536.1-201ENST00000569153 554 ntBASIC20.75■□□□□ 0.91
CXCR4P61073 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.75■□□□□ 0.91
CXCR4P61073 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.75■□□□□ 0.91
CXCR4P61073 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.75■□□□□ 0.91
CXCR4P61073 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.75■□□□□ 0.91
CXCR4P61073 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CXCR4P61073 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CXCR4P61073 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CXCR4P61073 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CXCR4P61073 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.74■□□□□ 0.91
CXCR4P61073 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CXCR4P61073 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CXCR4P61073 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.74■□□□□ 0.91
CXCR4P61073 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.74■□□□□ 0.91
CXCR4P61073 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
CXCR4P61073 AC022413.1-201ENST00000624602 984 ntBASIC20.74■□□□□ 0.91
CXCR4P61073 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CXCR4P61073 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CXCR4P61073 ESRRAP2-201ENST00000418437 1549 ntBASIC20.73■□□□□ 0.91
CXCR4P61073 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CXCR4P61073 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.73■□□□□ 0.91
CXCR4P61073 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CXCR4P61073 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CXCR4P61073 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.73■□□□□ 0.91
CXCR4P61073 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.73■□□□□ 0.91
CXCR4P61073 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC20.73■□□□□ 0.91
CXCR4P61073 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.73■□□□□ 0.91
CXCR4P61073 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CXCR4P61073 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CXCR4P61073 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CXCR4P61073 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
CXCR4P61073 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CXCR4P61073 AL161729.1-201ENST00000604104 1402 ntBASIC20.72■□□□□ 0.91
CXCR4P61073 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CXCR4P61073 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.72■□□□□ 0.91
CXCR4P61073 MIR639-201ENST00000384974 98 ntBASIC20.72■□□□□ 0.91
CXCR4P61073 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CXCR4P61073 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CXCR4P61073 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
CXCR4P61073 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
CXCR4P61073 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.72■□□□□ 0.91
CXCR4P61073 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.71■□□□□ 0.91
CXCR4P61073 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CXCR4P61073 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CXCR4P61073 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CXCR4P61073 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CXCR4P61073 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.71■□□□□ 0.91
CXCR4P61073 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CXCR4P61073 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.71■□□□□ 0.91
CXCR4P61073 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CXCR4P61073 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.71■□□□□ 0.91
CXCR4P61073 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CXCR4P61073 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.91
CXCR4P61073 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CXCR4P61073 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CXCR4P61073 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.7■□□□□ 0.9
CXCR4P61073 SRP68-213ENST00000629930 165 ntTSL 5 BASIC20.7■□□□□ 0.9
CXCR4P61073 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.7■□□□□ 0.9
CXCR4P61073 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.7■□□□□ 0.9
CXCR4P61073 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CXCR4P61073 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.7■□□□□ 0.9
CXCR4P61073 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CXCR4P61073 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms