Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.66■□□□□ 0.74
ATP1B3P54709 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.66■□□□□ 0.74
ATP1B3P54709 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATP1B3P54709 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
ATP1B3P54709 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATP1B3P54709 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATP1B3P54709 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.66■□□□□ 0.74
ATP1B3P54709 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ATP1B3P54709 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.65■□□□□ 0.74
ATP1B3P54709 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.65■□□□□ 0.74
ATP1B3P54709 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ATP1B3P54709 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATP1B3P54709 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.65■□□□□ 0.74
ATP1B3P54709 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATP1B3P54709 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
ATP1B3P54709 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.65■□□□□ 0.74
ATP1B3P54709 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.65■□□□□ 0.74
ATP1B3P54709 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATP1B3P54709 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.65■□□□□ 0.74
ATP1B3P54709 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
ATP1B3P54709 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC19.64■□□□□ 0.73
ATP1B3P54709 BHLHE23-202ENST00000612929 1109 ntBASIC19.64■□□□□ 0.73
ATP1B3P54709 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATP1B3P54709 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.64■□□□□ 0.73
ATP1B3P54709 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.64■□□□□ 0.73
ATP1B3P54709 AL022069.1-201ENST00000568025 1636 ntBASIC19.64■□□□□ 0.73
ATP1B3P54709 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
ATP1B3P54709 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ATP1B3P54709 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATP1B3P54709 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.64■□□□□ 0.73
ATP1B3P54709 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATP1B3P54709 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATP1B3P54709 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
ATP1B3P54709 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.63■□□□□ 0.73
ATP1B3P54709 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
ATP1B3P54709 C9orf163-202ENST00000624034 2573 ntBASIC19.63■□□□□ 0.73
ATP1B3P54709 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATP1B3P54709 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATP1B3P54709 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
ATP1B3P54709 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATP1B3P54709 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
ATP1B3P54709 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATP1B3P54709 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATP1B3P54709 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATP1B3P54709 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATP1B3P54709 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ATP1B3P54709 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ATP1B3P54709 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.62■□□□□ 0.73
ATP1B3P54709 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
ATP1B3P54709 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
ATP1B3P54709 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19.62■□□□□ 0.73
ATP1B3P54709 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATP1B3P54709 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
ATP1B3P54709 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATP1B3P54709 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ATP1B3P54709 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATP1B3P54709 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATP1B3P54709 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ATP1B3P54709 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
ATP1B3P54709 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.6■□□□□ 0.73
ATP1B3P54709 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.6■□□□□ 0.73
ATP1B3P54709 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ATP1B3P54709 AC074183.2-201ENST00000623112 922 ntBASIC19.6■□□□□ 0.73
ATP1B3P54709 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
ATP1B3P54709 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.6■□□□□ 0.73
ATP1B3P54709 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ATP1B3P54709 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.6■□□□□ 0.73
ATP1B3P54709 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATP1B3P54709 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATP1B3P54709 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATP1B3P54709 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
ATP1B3P54709 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.59■□□□□ 0.73
ATP1B3P54709 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
ATP1B3P54709 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATP1B3P54709 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATP1B3P54709 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATP1B3P54709 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATP1B3P54709 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.59■□□□□ 0.73
ATP1B3P54709 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.59■□□□□ 0.73
ATP1B3P54709 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ATP1B3P54709 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.59■□□□□ 0.73
ATP1B3P54709 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.59■□□□□ 0.73
ATP1B3P54709 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
ATP1B3P54709 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
ATP1B3P54709 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ATP1B3P54709 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC19.58■□□□□ 0.72
ATP1B3P54709 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC19.58■□□□□ 0.72
ATP1B3P54709 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
ATP1B3P54709 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
ATP1B3P54709 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
ATP1B3P54709 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.58■□□□□ 0.72
ATP1B3P54709 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
ATP1B3P54709 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATP1B3P54709 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.57■□□□□ 0.72
ATP1B3P54709 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATP1B3P54709 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATP1B3P54709 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATP1B3P54709 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATP1B3P54709 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ATP1B3P54709 AC004987.1-201ENST00000428627 508 ntBASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms