Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.26■□□□□ 0.83
SLC25A1P53007 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
SLC25A1P53007 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.26■□□□□ 0.83
SLC25A1P53007 DUX4L18-201ENST00000553347 1267 ntBASIC20.26■□□□□ 0.83
SLC25A1P53007 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC20.26■□□□□ 0.83
SLC25A1P53007 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SLC25A1P53007 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SLC25A1P53007 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC25A1P53007 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC25A1P53007 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.26■□□□□ 0.83
SLC25A1P53007 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC25A1P53007 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC25A1P53007 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SLC25A1P53007 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC25A1P53007 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC25A1P53007 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
SLC25A1P53007 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
SLC25A1P53007 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.25■□□□□ 0.83
SLC25A1P53007 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC25A1P53007 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.25■□□□□ 0.83
SLC25A1P53007 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.25■□□□□ 0.83
SLC25A1P53007 BRD4-212ENST00000630599 726 ntTSL 2 BASIC20.25■□□□□ 0.83
SLC25A1P53007 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.25■□□□□ 0.83
SLC25A1P53007 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
SLC25A1P53007 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC25A1P53007 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC25A1P53007 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC25A1P53007 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC25A1P53007 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
SLC25A1P53007 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.24■□□□□ 0.83
SLC25A1P53007 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC25A1P53007 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SLC25A1P53007 AC120024.1-201ENST00000562672 995 ntBASIC20.24■□□□□ 0.83
SLC25A1P53007 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.24■□□□□ 0.83
SLC25A1P53007 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC25A1P53007 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC25A1P53007 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
SLC25A1P53007 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC25A1P53007 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SLC25A1P53007 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.24■□□□□ 0.83
SLC25A1P53007 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.24■□□□□ 0.83
SLC25A1P53007 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
SLC25A1P53007 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC25A1P53007 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.23■□□□□ 0.83
SLC25A1P53007 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC25A1P53007 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.23■□□□□ 0.83
SLC25A1P53007 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
SLC25A1P53007 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.23■□□□□ 0.83
SLC25A1P53007 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC25A1P53007 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SLC25A1P53007 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.23■□□□□ 0.83
SLC25A1P53007 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC25A1P53007 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SLC25A1P53007 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC25A1P53007 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SLC25A1P53007 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC25A1P53007 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.22■□□□□ 0.83
SLC25A1P53007 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC25A1P53007 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.22■□□□□ 0.83
SLC25A1P53007 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.22■□□□□ 0.83
SLC25A1P53007 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.22■□□□□ 0.83
SLC25A1P53007 AC074183.2-201ENST00000623112 922 ntBASIC20.22■□□□□ 0.83
SLC25A1P53007 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
SLC25A1P53007 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SLC25A1P53007 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
SLC25A1P53007 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SLC25A1P53007 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC25A1P53007 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SLC25A1P53007 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
SLC25A1P53007 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC25A1P53007 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC25A1P53007 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SLC25A1P53007 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC25A1P53007 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC25A1P53007 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC25A1P53007 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC25A1P53007 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC25A1P53007 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.2■□□□□ 0.82
SLC25A1P53007 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC25A1P53007 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC25A1P53007 KRT18P24-201ENST00000344739 1156 ntBASIC20.2■□□□□ 0.82
SLC25A1P53007 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SLC25A1P53007 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC25A1P53007 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC25A1P53007 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SLC25A1P53007 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SLC25A1P53007 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SLC25A1P53007 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SLC25A1P53007 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SLC25A1P53007 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.2■□□□□ 0.82
SLC25A1P53007 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.2■□□□□ 0.82
SLC25A1P53007 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC25A1P53007 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
SLC25A1P53007 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SLC25A1P53007 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.19■□□□□ 0.82
SLC25A1P53007 BHLHE23-202ENST00000612929 1109 ntBASIC20.19■□□□□ 0.82
SLC25A1P53007 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
SLC25A1P53007 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC25A1P53007 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC25A1P53007 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms