Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HMGA2P52926 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HMGA2P52926 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HMGA2P52926 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HMGA2P52926 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HMGA2P52926 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HMGA2P52926 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
HMGA2P52926 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.88■□□□□ 0.93
HMGA2P52926 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HMGA2P52926 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HMGA2P52926 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HMGA2P52926 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HMGA2P52926 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.88■□□□□ 0.93
HMGA2P52926 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HMGA2P52926 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
HMGA2P52926 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HMGA2P52926 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HMGA2P52926 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.87■□□□□ 0.93
HMGA2P52926 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HMGA2P52926 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
HMGA2P52926 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC20.87■□□□□ 0.93
HMGA2P52926 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HMGA2P52926 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
HMGA2P52926 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.87■□□□□ 0.93
HMGA2P52926 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HMGA2P52926 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.86■□□□□ 0.93
HMGA2P52926 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HMGA2P52926 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
HMGA2P52926 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HMGA2P52926 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
HMGA2P52926 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
HMGA2P52926 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HMGA2P52926 AL592293.1-201ENST00000502889 1188 ntBASIC20.86■□□□□ 0.93
HMGA2P52926 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.86■□□□□ 0.93
HMGA2P52926 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
HMGA2P52926 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HMGA2P52926 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
HMGA2P52926 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.86■□□□□ 0.93
HMGA2P52926 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HMGA2P52926 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.86■□□□□ 0.93
HMGA2P52926 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.86■□□□□ 0.93
HMGA2P52926 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
HMGA2P52926 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.86■□□□□ 0.93
HMGA2P52926 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.86■□□□□ 0.93
HMGA2P52926 LINC00526-201ENST00000581067 1875 ntBASIC20.86■□□□□ 0.93
HMGA2P52926 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HMGA2P52926 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
HMGA2P52926 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
HMGA2P52926 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HMGA2P52926 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.85■□□□□ 0.93
HMGA2P52926 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.85■□□□□ 0.93
HMGA2P52926 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HMGA2P52926 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.85■□□□□ 0.93
HMGA2P52926 RNF126P1-201ENST00000567452 1320 ntBASIC20.85■□□□□ 0.93
HMGA2P52926 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HMGA2P52926 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HMGA2P52926 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HMGA2P52926 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC20.85■□□□□ 0.93
HMGA2P52926 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.85■□□□□ 0.93
HMGA2P52926 LINC00565-201ENST00000562710 2331 ntBASIC20.85■□□□□ 0.93
HMGA2P52926 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HMGA2P52926 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HMGA2P52926 GUSBP5-202ENST00000510805 1989 ntBASIC20.85■□□□□ 0.93
HMGA2P52926 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HMGA2P52926 ALDH1A3-203ENST00000557963 1670 ntBASIC20.84■□□□□ 0.93
HMGA2P52926 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
HMGA2P52926 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
HMGA2P52926 LONRF2P2-201ENST00000439212 571 ntBASIC20.84■□□□□ 0.93
HMGA2P52926 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HMGA2P52926 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
HMGA2P52926 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HMGA2P52926 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HMGA2P52926 ECEL1P1-201ENST00000373592 1742 ntBASIC20.84■□□□□ 0.93
HMGA2P52926 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
HMGA2P52926 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
HMGA2P52926 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
HMGA2P52926 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HMGA2P52926 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.83■□□□□ 0.93
HMGA2P52926 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
HMGA2P52926 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HMGA2P52926 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HMGA2P52926 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HMGA2P52926 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.83■□□□□ 0.92
HMGA2P52926 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
HMGA2P52926 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HMGA2P52926 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.82■□□□□ 0.92
HMGA2P52926 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.82■□□□□ 0.92
HMGA2P52926 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HMGA2P52926 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HMGA2P52926 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HMGA2P52926 MIR6765-201ENST00000614092 87 ntBASIC20.82■□□□□ 0.92
HMGA2P52926 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HMGA2P52926 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HMGA2P52926 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.82■□□□□ 0.92
HMGA2P52926 AC131274.2-201ENST00000580697 1507 ntBASIC20.82■□□□□ 0.92
HMGA2P52926 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
HMGA2P52926 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HMGA2P52926 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
HMGA2P52926 AC127496.7-201ENST00000625110 1798 ntBASIC20.82■□□□□ 0.92
HMGA2P52926 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms