Protein–RNA interactions for Protein: P48378

RFX2, DNA-binding protein RFX2, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX2P48378 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC19.8■□□□□ 0.76
RFX2P48378 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC19.8■□□□□ 0.76
RFX2P48378 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RFX2P48378 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.8■□□□□ 0.76
RFX2P48378 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
RFX2P48378 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFX2P48378 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFX2P48378 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
RFX2P48378 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RFX2P48378 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.79■□□□□ 0.76
RFX2P48378 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RFX2P48378 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
RFX2P48378 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFX2P48378 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFX2P48378 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RFX2P48378 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RFX2P48378 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFX2P48378 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
RFX2P48378 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RFX2P48378 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFX2P48378 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
RFX2P48378 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
RFX2P48378 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.78■□□□□ 0.76
RFX2P48378 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
RFX2P48378 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RFX2P48378 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFX2P48378 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
RFX2P48378 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
RFX2P48378 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFX2P48378 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFX2P48378 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
RFX2P48378 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC19.78■□□□□ 0.76
RFX2P48378 DUX4L11-201ENST00000611504 1267 ntBASIC19.78■□□□□ 0.76
RFX2P48378 DUX4L12-201ENST00000614593 1267 ntBASIC19.78■□□□□ 0.76
RFX2P48378 DUX4L14-201ENST00000621227 1267 ntBASIC19.78■□□□□ 0.76
RFX2P48378 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.78■□□□□ 0.76
RFX2P48378 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RFX2P48378 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFX2P48378 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RFX2P48378 AC242852.2-201ENST00000615738 1807 ntBASIC19.77■□□□□ 0.76
RFX2P48378 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RFX2P48378 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RFX2P48378 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RFX2P48378 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
RFX2P48378 HES6-205ENST00000409356 528 ntTSL 2 BASIC19.77■□□□□ 0.76
RFX2P48378 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC19.77■□□□□ 0.76
RFX2P48378 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC19.77■□□□□ 0.76
RFX2P48378 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC19.77■□□□□ 0.76
RFX2P48378 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC19.77■□□□□ 0.76
RFX2P48378 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
RFX2P48378 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RFX2P48378 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC19.77■□□□□ 0.76
RFX2P48378 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.77■□□□□ 0.75
RFX2P48378 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RFX2P48378 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFX2P48378 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.76■□□□□ 0.75
RFX2P48378 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
RFX2P48378 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFX2P48378 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFX2P48378 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFX2P48378 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RFX2P48378 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFX2P48378 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFX2P48378 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
RFX2P48378 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RFX2P48378 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.75■□□□□ 0.75
RFX2P48378 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
RFX2P48378 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC19.75■□□□□ 0.75
RFX2P48378 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
RFX2P48378 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RFX2P48378 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RFX2P48378 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RFX2P48378 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
RFX2P48378 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
RFX2P48378 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
RFX2P48378 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
RFX2P48378 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RFX2P48378 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.74■□□□□ 0.75
RFX2P48378 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
RFX2P48378 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
RFX2P48378 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RFX2P48378 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RFX2P48378 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.74■□□□□ 0.75
RFX2P48378 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.74■□□□□ 0.75
RFX2P48378 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFX2P48378 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RFX2P48378 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFX2P48378 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
RFX2P48378 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RFX2P48378 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
RFX2P48378 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RFX2P48378 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RFX2P48378 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.72■□□□□ 0.75
RFX2P48378 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RFX2P48378 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
RFX2P48378 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFX2P48378 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFX2P48378 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFX2P48378 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC19.71■□□□□ 0.75
RFX2P48378 AC126177.7-201ENST00000547904 679 ntBASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms