Protein–RNA interactions for Protein: P43588

RPN11, Ubiquitin carboxyl-terminal hydrolase RPN11, yeastyeast

Known RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN11P43588 HMLALPHA1YCL066W 528 nt5.62□□□□□ -1.51
RPN11P43588 MATALPHA1YCR040W 528 nt5.62□□□□□ -1.51
RPN11P43588 tS(AGA)D3tS(AGA)D3 83 nt5.62□□□□□ -1.51
RPN11P43588 TIF34YMR146C 1044 nt5.62□□□□□ -1.51
RPN11P43588 RMI1YPL024W 726 nt5.62□□□□□ -1.51
RPN11P43588 SUP35YDR172W 2058 nt5.62□□□□□ -1.51
RPN11P43588 CWC2YDL209C 1020 nt5.61□□□□□ -1.51
RPN11P43588 YDR445CYDR445C 408 nt5.61□□□□□ -1.51
RPN11P43588 YER145C-AYER145C-A 438 nt5.61□□□□□ -1.51
RPN11P43588 THS1YIL078W 2205 nt5.61□□□□□ -1.51
RPN11P43588 YIR018C-AYIR018C-A 138 nt5.61□□□□□ -1.51
RPN11P43588 YIR043CYIR043C 693 nt5.61□□□□□ -1.51
RPN11P43588 ECM7YLR443W 1347 nt5.61□□□□□ -1.51
RPN11P43588 HEM15YOR176W 1182 nt5.61□□□□□ -1.51
RPN11P43588 MUM3YOR298W 1440 nt5.61□□□□□ -1.51
RPN11P43588 MRS2YOR334W 1413 nt5.61□□□□□ -1.51
RPN11P43588 MRPL3YMR024W 1173 nt5.6□□□□□ -1.51
RPN11P43588 YMR245WYMR245W 621 nt5.6□□□□□ -1.51
RPN11P43588 TLG2YOL018C 1194 nt5.6□□□□□ -1.51
RPN11P43588 MET31YPL038W 534 nt5.6□□□□□ -1.51
RPN11P43588 RMD9YGL107C 1941 nt5.6□□□□□ -1.51
RPN11P43588 DAK1YML070W 1755 nt5.6□□□□□ -1.51
RPN11P43588 BNA5YLR231C 1362 nt5.59□□□□□ -1.51
RPN11P43588 TRX2YGR209C 315 nt5.59□□□□□ -1.51
RPN11P43588 MED4YOR174W 855 nt5.59□□□□□ -1.51
RPN11P43588 CTR1YPR124W 1221 nt5.59□□□□□ -1.51
RPN11P43588 MET16YPR167C 786 nt5.59□□□□□ -1.51
RPN11P43588 YPL245WYPL245W 1365 nt5.58□□□□□ -1.52
RPN11P43588 CUE2YKL090W 1332 nt5.58□□□□□ -1.52
RPN11P43588 YDR282CYDR282C 1245 nt5.58□□□□□ -1.52
RPN11P43588 NCS6YGL211W 1080 nt5.58□□□□□ -1.52
RPN11P43588 SPC42YKL042W 1092 nt5.58□□□□□ -1.52
RPN11P43588 TBF1YPL128C 1689 nt5.58□□□□□ -1.52
RPN11P43588 ADY3YDL239C 2373 nt5.58□□□□□ -1.52
RPN11P43588 YBR284WYBR284W 2394 nt5.58□□□□□ -1.52
RPN11P43588 HAP1YLR256W 4509 nt5.58□□□□□ -1.52
RPN11P43588 VHS1YDR247W 1386 nt5.57□□□□□ -1.52
RPN11P43588 YDL228CYDL228C 642 nt5.57□□□□□ -1.52
RPN11P43588 YGR153WYGR153W 654 nt5.57□□□□□ -1.52
RPN11P43588 YKR075CYKR075C 924 nt5.57□□□□□ -1.52
RPN11P43588 RRP40YOL142W 723 nt5.57□□□□□ -1.52
RPN11P43588 RDL2YOR286W 450 nt5.57□□□□□ -1.52
RPN11P43588 HXT2YMR011W 1626 nt5.56□□□□□ -1.52
RPN11P43588 NMD3YHR170W 1557 nt5.56□□□□□ -1.52
RPN11P43588 TRS33YOR115C 807 nt5.56□□□□□ -1.52
RPN11P43588 SCP1YOR367W 603 nt5.56□□□□□ -1.52
RPN11P43588 YPR059CYPR059C 387 nt5.56□□□□□ -1.52
RPN11P43588 PMT2YAL023C 2280 nt5.56□□□□□ -1.52
RPN11P43588 MTR10YOR160W 2919 nt5.56□□□□□ -1.52
RPN11P43588 SPO77YLR341W 1434 nt5.56□□□□□ -1.52
RPN11P43588 YOR1YGR281W 4434 nt5.56□□□□□ -1.52
RPN11P43588 BUD22YMR014W 1560 nt5.55□□□□□ -1.52
RPN11P43588 HPF1YOL155C 2904 nt5.55□□□□□ -1.52
RPN11P43588 RPB7YDR404C 516 nt5.55□□□□□ -1.52
RPN11P43588 YHP1YDR451C 1062 nt5.55□□□□□ -1.52
RPN11P43588 ERG20YJL167W 1059 nt5.55□□□□□ -1.52
RPN11P43588 RKM4YDR257C 1485 nt5.55□□□□□ -1.52
RPN11P43588 FAR10YLR238W 1437 nt5.55□□□□□ -1.52
RPN11P43588 TDA1YMR291W 1761 nt5.55□□□□□ -1.52
RPN11P43588 MTC5YDR128W 3447 nt5.54□□□□□ -1.52
RPN11P43588 CLP1YOR250C 1338 nt5.54□□□□□ -1.52
RPN11P43588 KEL1YHR158C 3495 nt5.54□□□□□ -1.52
RPN11P43588 SRG1SRG1 551 nt5.54□□□□□ -1.52
RPN11P43588 RTT103YDR289C 1230 nt5.54□□□□□ -1.52
RPN11P43588 CNN1YFR046C 1086 nt5.54□□□□□ -1.52
RPN11P43588 YGL118CYGL118C 438 nt5.54□□□□□ -1.52
RPN11P43588 PHM7YOL084W 2976 nt5.54□□□□□ -1.52
RPN11P43588 CYC8YBR112C 2901 nt5.54□□□□□ -1.52
RPN11P43588 YIL055CYIL055C 1884 nt5.54□□□□□ -1.52
RPN11P43588 RPL12AYEL054C 498 nt5.53□□□□□ -1.52
RPN11P43588 PCL6YER059W 1263 nt5.53□□□□□ -1.52
RPN11P43588 HER2YMR293C 1395 nt5.53□□□□□ -1.52
RPN11P43588 SEC18YBR080C 2277 nt5.53□□□□□ -1.52
RPN11P43588 EFT2YDR385W 2529 nt5.52□□□□□ -1.53
RPN11P43588 EFT1YOR133W 2529 nt5.52□□□□□ -1.53
RPN11P43588 CPR4YCR069W 957 nt5.52□□□□□ -1.53
RPN11P43588 VCX1YDL128W 1236 nt5.52□□□□□ -1.53
RPN11P43588 SEM1YDR363W-A 270 nt5.52□□□□□ -1.53
RPN11P43588 GTO1YGR154C 1071 nt5.52□□□□□ -1.53
RPN11P43588 COA3YJL062W-A 258 nt5.52□□□□□ -1.53
RPN11P43588 ACS1YAL054C 2142 nt5.52□□□□□ -1.53
RPN11P43588 QCR2YPR191W 1107 nt5.52□□□□□ -1.53
RPN11P43588 PTK2YJR059W 2457 nt5.52□□□□□ -1.53
RPN11P43588 SUL2YLR092W 2682 nt5.51□□□□□ -1.53
RPN11P43588 OXP1YKL215C 3861 nt5.51□□□□□ -1.53
RPN11P43588 DNF2YDR093W 4839 nt5.51□□□□□ -1.53
RPN11P43588 YDR417CYDR417C 372 nt5.51□□□□□ -1.53
RPN11P43588 IRC22YEL001C 678 nt5.51□□□□□ -1.53
RPN11P43588 SOH1YGL127C 384 nt5.51□□□□□ -1.53
RPN11P43588 MIC26YGR235C 702 nt5.51□□□□□ -1.53
RPN11P43588 AMA1YGR225W 1782 nt5.51□□□□□ -1.53
RPN11P43588 CHL4YDR254W 1377 nt5.51□□□□□ -1.53
RPN11P43588 VAN1YML115C 1608 nt5.51□□□□□ -1.53
RPN11P43588 YDR132CYDR132C 1488 nt5.51□□□□□ -1.53
RPN11P43588 SVF1YDR346C 1446 nt5.5□□□□□ -1.53
RPN11P43588 SIT1YEL065W 1887 nt5.5□□□□□ -1.53
RPN11P43588 COQ4YDR204W 1008 nt5.5□□□□□ -1.53
RPN11P43588 BUD25YER014C-A 462 nt5.5□□□□□ -1.53
RPN11P43588 DCD1YHR144C 939 nt5.5□□□□□ -1.53
RPN11P43588 FMP46YKR049C 402 nt5.5□□□□□ -1.53
Retrieved 100 of 7,029 protein–RNA pairs in 118.3 ms