Protein–RNA interactions for Protein: P38711

RPS27B, 40S ribosomal protein S27-B, yeastyeast

Predictions only

Length 82 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPS27BP38711 tK(CUU)G3tK(CUU)G3 73 nt3.92□□□□□ -1.78
RPS27BP38711 tK(CUU)ItK(CUU)I 73 nt3.92□□□□□ -1.78
RPS27BP38711 tK(CUU)JtK(CUU)J 73 nt3.92□□□□□ -1.78
RPS27BP38711 tK(CUU)KtK(CUU)K 73 nt3.92□□□□□ -1.78
RPS27BP38711 tK(CUU)MtK(CUU)M 73 nt3.92□□□□□ -1.78
RPS27BP38711 tK(CUU)PtK(CUU)P 73 nt3.92□□□□□ -1.78
RPS27BP38711 RMR1YGL250W 726 nt3.92□□□□□ -1.78
RPS27BP38711 NPT1YOR209C 1290 nt3.92□□□□□ -1.78
RPS27BP38711 DBF4YDR052C 2115 nt3.92□□□□□ -1.78
RPS27BP38711 IMA3YIL172C 1770 nt3.91□□□□□ -1.78
RPS27BP38711 IMA4YJL221C 1770 nt3.91□□□□□ -1.78
RPS27BP38711 PER1YCR044C 1074 nt3.91□□□□□ -1.78
RPS27BP38711 CSR1YLR380W 1227 nt3.91□□□□□ -1.78
RPS27BP38711 MRP21YBL090W 534 nt3.91□□□□□ -1.78
RPS27BP38711 VPS68YOL129W 555 nt3.91□□□□□ -1.78
RPS27BP38711 ARC40YBR234C 1155 nt3.91□□□□□ -1.78
RPS27BP38711 GWT1YJL091C 1473 nt3.91□□□□□ -1.78
RPS27BP38711 ENP1YBR247C 1452 nt3.91□□□□□ -1.78
RPS27BP38711 BOP2YLR267W 1713 nt3.9□□□□□ -1.78
RPS27BP38711 RPC53YDL150W 1269 nt3.9□□□□□ -1.79
RPS27BP38711 CDC42YLR229C 576 nt3.9□□□□□ -1.79
RPS27BP38711 MRPL3YMR024W 1173 nt3.9□□□□□ -1.79
RPS27BP38711 YOR131CYOR131C 657 nt3.9□□□□□ -1.79
RPS27BP38711 NUP1YOR098C 3231 nt3.9□□□□□ -1.79
RPS27BP38711 TRM11YOL124C 1302 nt3.9□□□□□ -1.79
RPS27BP38711 GPA1YHR005C 1419 nt3.89□□□□□ -1.79
RPS27BP38711 RAD52YML032C 1416 nt3.89□□□□□ -1.79
RPS27BP38711 YOS9YDR057W 1629 nt3.89□□□□□ -1.79
RPS27BP38711 MIC26YGR235C 702 nt3.89□□□□□ -1.79
RPS27BP38711 EFB1YAL003W 621 nt3.89□□□□□ -1.79
RPS27BP38711 AST1YBL069W 1290 nt3.89□□□□□ -1.79
RPS27BP38711 PGM2YMR105C 1710 nt3.89□□□□□ -1.79
RPS27BP38711 MSK1YNL073W 1731 nt3.89□□□□□ -1.79
RPS27BP38711 MAL13YGR288W 1422 nt3.88□□□□□ -1.79
RPS27BP38711 RRN3YKL125W 1884 nt3.88□□□□□ -1.79
RPS27BP38711 YEL020CYEL020C 1683 nt3.88□□□□□ -1.79
RPS27BP38711 FLC1YPL221W 2382 nt3.88□□□□□ -1.79
RPS27BP38711 NUP2YLR335W 2163 nt3.88□□□□□ -1.79
RPS27BP38711 YDL228CYDL228C 642 nt3.88□□□□□ -1.79
RPS27BP38711 BUD13YGL174W 801 nt3.88□□□□□ -1.79
RPS27BP38711 GPP1YIL053W 753 nt3.88□□□□□ -1.79
RPS27BP38711 MRPL20YKR085C 588 nt3.88□□□□□ -1.79
RPS27BP38711 YIM1YMR152W 1098 nt3.88□□□□□ -1.79
RPS27BP38711 PMA1YGL008C 2757 nt3.88□□□□□ -1.79
RPS27BP38711 TUP1YCR084C 2142 nt3.88□□□□□ -1.79
RPS27BP38711 BRE4YDL231C 3378 nt3.87□□□□□ -1.79
RPS27BP38711 YDR246W-AYDR246W-A 201 nt3.87□□□□□ -1.79
RPS27BP38711 TVP38YKR088C 1014 nt3.87□□□□□ -1.79
RPS27BP38711 ASK10YGR097W 3441 nt3.86□□□□□ -1.79
RPS27BP38711 YDR133CYDR133C 336 nt3.86□□□□□ -1.79
RPS27BP38711 YGL088WYGL088W 366 nt3.86□□□□□ -1.79
RPS27BP38711 ARC1YGL105W 1131 nt3.86□□□□□ -1.79
RPS27BP38711 YIL171WYIL171W 330 nt3.86□□□□□ -1.79
RPS27BP38711 MTF1YMR228W 1026 nt3.86□□□□□ -1.79
RPS27BP38711 MET4YNL103W 2019 nt3.86□□□□□ -1.79
RPS27BP38711 OCA5YHL029C 2040 nt3.85□□□□□ -1.79
RPS27BP38711 CST6YIL036W 1764 nt3.85□□□□□ -1.79
RPS27BP38711 PTC1YDL006W 846 nt3.85□□□□□ -1.79
RPS27BP38711 tQ(UUG)CtQ(UUG)C 72 nt3.85□□□□□ -1.79
RPS27BP38711 tQ(UUG)D1tQ(UUG)D1 72 nt3.85□□□□□ -1.79
RPS27BP38711 tQ(UUG)D2tQ(UUG)D2 72 nt3.85□□□□□ -1.79
RPS27BP38711 tQ(UUG)D3tQ(UUG)D3 72 nt3.85□□□□□ -1.79
RPS27BP38711 tQ(UUG)E1tQ(UUG)E1 72 nt3.85□□□□□ -1.79
RPS27BP38711 tQ(UUG)HtQ(UUG)H 72 nt3.85□□□□□ -1.79
RPS27BP38711 tQ(UUG)LtQ(UUG)L 72 nt3.85□□□□□ -1.79
RPS27BP38711 DSS4YPR017C 432 nt3.85□□□□□ -1.79
RPS27BP38711 TIP41YPR040W 1071 nt3.85□□□□□ -1.79
RPS27BP38711 SUA7YPR086W 1038 nt3.85□□□□□ -1.79
RPS27BP38711 TFC6YDR362C 2019 nt3.85□□□□□ -1.79
RPS27BP38711 RSC58YLR033W 1509 nt3.85□□□□□ -1.79
RPS27BP38711 SPC105YGL093W 2754 nt3.85□□□□□ -1.79
RPS27BP38711 YDR056CYDR056C 618 nt3.84□□□□□ -1.79
RPS27BP38711 HPM1YIL110W 1134 nt3.84□□□□□ -1.79
RPS27BP38711 YJR038CYJR038C 363 nt3.84□□□□□ -1.79
RPS27BP38711 RAD27YKL113C 1149 nt3.84□□□□□ -1.79
RPS27BP38711 RDN5-1RDN5-1 121 nt3.84□□□□□ -1.79
RPS27BP38711 RDN5-6RDN5-6 121 nt3.84□□□□□ -1.79
RPS27BP38711 COG5YNL051W 1212 nt3.84□□□□□ -1.79
RPS27BP38711 VPS69YPR087W 321 nt3.84□□□□□ -1.79
RPS27BP38711 LAS1YKR063C 1509 nt3.84□□□□□ -1.8
RPS27BP38711 DSC2YOL073C 969 nt3.83□□□□□ -1.8
RPS27BP38711 PRD1YCL057W 2139 nt3.83□□□□□ -1.8
RPS27BP38711 ALT2YDR111C 1524 nt3.82□□□□□ -1.8
RPS27BP38711 KRE29YER038C 1395 nt3.82□□□□□ -1.8
RPS27BP38711 TFC7YOR110W 1308 nt3.82□□□□□ -1.8
RPS27BP38711 AAD6YFL056C 639 nt3.82□□□□□ -1.8
RPS27BP38711 UTP11YKL099C 753 nt3.82□□□□□ -1.8
RPS27BP38711 HEK2YBL032W 1146 nt3.82□□□□□ -1.8
RPS27BP38711 YPR059CYPR059C 387 nt3.82□□□□□ -1.8
RPS27BP38711 RPL19AYBR084C-A 570 nt3.82□□□□□ -1.8
RPS27BP38711 HXT7YDR342C 1713 nt3.81□□□□□ -1.8
RPS27BP38711 HXT6YDR343C 1713 nt3.81□□□□□ -1.8
RPS27BP38711 CTT1YGR088W 1689 nt3.81□□□□□ -1.8
RPS27BP38711 MET17YLR303W 1335 nt3.81□□□□□ -1.8
RPS27BP38711 IRC22YEL001C 678 nt3.81□□□□□ -1.8
RPS27BP38711 BUD16YEL029C 939 nt3.81□□□□□ -1.8
RPS27BP38711 CAF16YFL028C 870 nt3.81□□□□□ -1.8
RPS27BP38711 YIL021C-AYIL021C-A 270 nt3.81□□□□□ -1.8
RPS27BP38711 SNF8YPL002C 702 nt3.81□□□□□ -1.8
RPS27BP38711 DAL4YIR028W 1908 nt3.81□□□□□ -1.8
Retrieved 100 of 7,029 protein–RNA pairs in 21.2 ms