Protein–RNA interactions for Protein: P32239

CCKBR, Gastrin/cholecystokinin type B receptor, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCKBRP32239 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCKBRP32239 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCKBRP32239 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.91■■□□□ 1.1
CCKBRP32239 AC027682.1-201ENST00000562846 899 ntBASIC21.91■■□□□ 1.1
CCKBRP32239 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCKBRP32239 AC104564.3-201ENST00000582367 638 ntBASIC21.9■■□□□ 1.1
CCKBRP32239 CA15P2-201ENST00000611168 834 ntBASIC21.9■■□□□ 1.1
CCKBRP32239 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
CCKBRP32239 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.9■■□□□ 1.1
CCKBRP32239 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.89■■□□□ 1.09
CCKBRP32239 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.89■■□□□ 1.09
CCKBRP32239 AC241377.3-202ENST00000626088 1088 ntBASIC21.89■■□□□ 1.09
CCKBRP32239 AC241585.3-202ENST00000628937 1088 ntBASIC21.89■■□□□ 1.09
CCKBRP32239 AC245100.8-202ENST00000629247 1058 ntBASIC21.89■■□□□ 1.09
CCKBRP32239 C17orf82-201ENST00000623772 1530 ntBASIC21.89■■□□□ 1.09
CCKBRP32239 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.88■■□□□ 1.09
CCKBRP32239 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCKBRP32239 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.88■■□□□ 1.09
CCKBRP32239 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
CCKBRP32239 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.88■■□□□ 1.09
CCKBRP32239 MIR6821-201ENST00000617625 74 ntBASIC21.88■■□□□ 1.09
CCKBRP32239 DUSP8P4-201ENST00000399538 1761 ntBASIC21.88■■□□□ 1.09
CCKBRP32239 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.88■■□□□ 1.09
CCKBRP32239 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.87■■□□□ 1.09
CCKBRP32239 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.87■■□□□ 1.09
CCKBRP32239 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.87■■□□□ 1.09
CCKBRP32239 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
CCKBRP32239 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.87■■□□□ 1.09
CCKBRP32239 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.87■■□□□ 1.09
CCKBRP32239 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.87■■□□□ 1.09
CCKBRP32239 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CCKBRP32239 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCKBRP32239 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
CCKBRP32239 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCKBRP32239 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.86■■□□□ 1.09
CCKBRP32239 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCKBRP32239 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CCKBRP32239 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
CCKBRP32239 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCKBRP32239 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.85■■□□□ 1.09
CCKBRP32239 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.85■■□□□ 1.09
CCKBRP32239 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.85■■□□□ 1.09
CCKBRP32239 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCKBRP32239 AC097381.1-201ENST00000429019 1296 ntBASIC21.85■■□□□ 1.09
CCKBRP32239 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.85■■□□□ 1.09
CCKBRP32239 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.85■■□□□ 1.09
CCKBRP32239 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCKBRP32239 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCKBRP32239 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
CCKBRP32239 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CCKBRP32239 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCKBRP32239 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.84■■□□□ 1.09
CCKBRP32239 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.84■■□□□ 1.09
CCKBRP32239 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.84■■□□□ 1.09
CCKBRP32239 AC136469.2-201ENST00000623944 1028 ntBASIC21.84■■□□□ 1.09
CCKBRP32239 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CCKBRP32239 AC135731.1-201ENST00000569415 2548 ntBASIC21.84■■□□□ 1.09
CCKBRP32239 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CCKBRP32239 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
CCKBRP32239 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
CCKBRP32239 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCKBRP32239 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCKBRP32239 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CCKBRP32239 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CCKBRP32239 AL161729.1-201ENST00000604104 1402 ntBASIC21.83■■□□□ 1.09
CCKBRP32239 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
CCKBRP32239 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.83■■□□□ 1.09
CCKBRP32239 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.83■■□□□ 1.09
CCKBRP32239 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.83■■□□□ 1.09
CCKBRP32239 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.83■■□□□ 1.09
CCKBRP32239 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.83■■□□□ 1.09
CCKBRP32239 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.82■■□□□ 1.08
CCKBRP32239 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCKBRP32239 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCKBRP32239 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.82■■□□□ 1.08
CCKBRP32239 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCKBRP32239 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CCKBRP32239 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCKBRP32239 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCKBRP32239 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
CCKBRP32239 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.82■■□□□ 1.08
CCKBRP32239 AC008764.7-201ENST00000593779 1081 ntBASIC21.82■■□□□ 1.08
CCKBRP32239 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCKBRP32239 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CCKBRP32239 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CCKBRP32239 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCKBRP32239 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.81■■□□□ 1.08
CCKBRP32239 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCKBRP32239 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.81■■□□□ 1.08
CCKBRP32239 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCKBRP32239 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCKBRP32239 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.81■■□□□ 1.08
CCKBRP32239 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCKBRP32239 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCKBRP32239 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCKBRP32239 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
CCKBRP32239 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.8■■□□□ 1.08
CCKBRP32239 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CCKBRP32239 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.8■■□□□ 1.08
CCKBRP32239 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms