Protein–RNA interactions for Protein: P25655

CDC39, General negative regulator of transcription subunit 1, yeastyeast

Known RBP Predictions only

Length 2,108 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC39P25655 YBR126W-AYBR126W-A 207 nt3.91□□□□□ -1.78
CDC39P25655 KGD1YIL125W 3045 nt3.91□□□□□ -1.78
CDC39P25655 TOS3YGL179C 1683 nt3.91□□□□□ -1.78
CDC39P25655 YER158CYER158C 1722 nt3.91□□□□□ -1.78
CDC39P25655 CAF4YKR036C 1932 nt3.91□□□□□ -1.78
CDC39P25655 YDR545C-AYDR545C-A 480 nt3.91□□□□□ -1.78
CDC39P25655 YEL077W-AYEL077W-A 483 nt3.91□□□□□ -1.78
CDC39P25655 YER190C-BYER190C-B 483 nt3.91□□□□□ -1.78
CDC39P25655 YFL068WYFL068W 483 nt3.91□□□□□ -1.78
CDC39P25655 YGR296C-BYGR296C-B 483 nt3.91□□□□□ -1.78
CDC39P25655 YHL050W-AYHL050W-A 483 nt3.91□□□□□ -1.78
CDC39P25655 YHR219C-AYHR219C-A 483 nt3.91□□□□□ -1.78
CDC39P25655 YIL177W-AYIL177W-A 483 nt3.91□□□□□ -1.78
CDC39P25655 YJL225W-AYJL225W-A 483 nt3.91□□□□□ -1.78
CDC39P25655 YLL066W-AYLL066W-A 483 nt3.91□□□□□ -1.78
CDC39P25655 YLL067W-AYLL067W-A 483 nt3.91□□□□□ -1.78
CDC39P25655 APS1YLR170C 471 nt3.91□□□□□ -1.78
CDC39P25655 YLR466C-AYLR466C-A 483 nt3.91□□□□□ -1.78
CDC39P25655 YLR467C-AYLR467C-A 483 nt3.91□□□□□ -1.78
CDC39P25655 YML133W-BYML133W-B 483 nt3.91□□□□□ -1.78
CDC39P25655 MTF1YMR228W 1026 nt3.91□□□□□ -1.78
CDC39P25655 YNL339W-BYNL339W-B 483 nt3.91□□□□□ -1.78
CDC39P25655 YBL113W-AYBL113W-A 483 nt3.91□□□□□ -1.78
CDC39P25655 YOR396C-AYOR396C-A 483 nt3.91□□□□□ -1.78
CDC39P25655 YPL283W-BYPL283W-B 483 nt3.91□□□□□ -1.78
CDC39P25655 YPR204C-AYPR204C-A 483 nt3.91□□□□□ -1.78
CDC39P25655 YFL052WYFL052W 1398 nt3.9□□□□□ -1.79
CDC39P25655 PIC2YER053C 903 nt3.9□□□□□ -1.79
CDC39P25655 PUS5YLR165C 765 nt3.9□□□□□ -1.79
CDC39P25655 POP4YBR257W 840 nt3.9□□□□□ -1.79
CDC39P25655 TFG1YGR186W 2208 nt3.9□□□□□ -1.79
CDC39P25655 CHS5YLR330W 2016 nt3.9□□□□□ -1.79
CDC39P25655 TIP41YPR040W 1071 nt3.89□□□□□ -1.79
CDC39P25655 BOP2YLR267W 1713 nt3.89□□□□□ -1.79
CDC39P25655 PAN1YIR006C 4443 nt3.89□□□□□ -1.79
CDC39P25655 CHL4YDR254W 1377 nt3.89□□□□□ -1.79
CDC39P25655 PRO2YOR323C 1371 nt3.89□□□□□ -1.79
CDC39P25655 ASK10YGR097W 3441 nt3.89□□□□□ -1.79
CDC39P25655 DPB4YDR121W 591 nt3.89□□□□□ -1.79
CDC39P25655 MDR1YGR100W 2853 nt3.89□□□□□ -1.79
CDC39P25655 SSH4YKL124W 1740 nt3.88□□□□□ -1.79
CDC39P25655 FHL1YPR104C 2811 nt3.88□□□□□ -1.79
CDC39P25655 IMA1YGR287C 1770 nt3.88□□□□□ -1.79
CDC39P25655 ARG82YDR173C 1068 nt3.88□□□□□ -1.79
CDC39P25655 SUM1YDR310C 3189 nt3.88□□□□□ -1.79
CDC39P25655 CEG1YGL130W 1380 nt3.88□□□□□ -1.79
CDC39P25655 STE20YHL007C 2820 nt3.88□□□□□ -1.79
CDC39P25655 CRT10YOL063C 2874 nt3.88□□□□□ -1.79
CDC39P25655 LSO1YJR005C-A 282 nt3.88□□□□□ -1.79
CDC39P25655 PAP1YKR002W 1707 nt3.88□□□□□ -1.79
CDC39P25655 CLF1YLR117C 2064 nt3.87□□□□□ -1.79
CDC39P25655 PAP2YOL115W 1755 nt3.87□□□□□ -1.79
CDC39P25655 YDR133CYDR133C 336 nt3.87□□□□□ -1.79
CDC39P25655 tS(AGA)D3tS(AGA)D3 83 nt3.87□□□□□ -1.79
CDC39P25655 YKE4YIL023C 1041 nt3.87□□□□□ -1.79
CDC39P25655 YIM1YMR152W 1098 nt3.87□□□□□ -1.79
CDC39P25655 CLA4YNL298W 2529 nt3.87□□□□□ -1.79
CDC39P25655 PAH1YMR165C 2589 nt3.87□□□□□ -1.79
CDC39P25655 FLO8YER109C 2400 nt3.87□□□□□ -1.79
CDC39P25655 UBA2YDR390C 1911 nt3.87□□□□□ -1.79
CDC39P25655 RXT3YDL076C 885 nt3.86□□□□□ -1.79
CDC39P25655 GRX4YER174C 735 nt3.86□□□□□ -1.79
CDC39P25655 CDC11YJR076C 1248 nt3.86□□□□□ -1.79
CDC39P25655 UTP11YKL099C 753 nt3.86□□□□□ -1.79
CDC39P25655 URE2YNL229C 1065 nt3.86□□□□□ -1.79
CDC39P25655 MDY2YOL111C 639 nt3.86□□□□□ -1.79
CDC39P25655 ZPR1YGR211W 1461 nt3.86□□□□□ -1.79
CDC39P25655 GDB1YPR184W 4611 nt3.86□□□□□ -1.79
CDC39P25655 ABF1YKL112W 2196 nt3.86□□□□□ -1.79
CDC39P25655 YFR035CYFR035C 345 nt3.86□□□□□ -1.79
CDC39P25655 YFR052C-AYFR052C-A 306 nt3.86□□□□□ -1.79
CDC39P25655 MID2YLR332W 1131 nt3.86□□□□□ -1.79
CDC39P25655 SNF8YPL002C 702 nt3.86□□□□□ -1.79
CDC39P25655 SPO19YPL130W 672 nt3.86□□□□□ -1.79
CDC39P25655 YCL021W-AYCL021W-A 378 nt3.86□□□□□ -1.79
CDC39P25655 RAD28YDR030C 1521 nt3.86□□□□□ -1.79
CDC39P25655 AKL1YBR059C 3327 nt3.85□□□□□ -1.79
CDC39P25655 SHO1YER118C 1104 nt3.85□□□□□ -1.79
CDC39P25655 RMR1YGL250W 726 nt3.85□□□□□ -1.79
CDC39P25655 PER1YCR044C 1074 nt3.85□□□□□ -1.79
CDC39P25655 MSN2YMR037C 2115 nt3.84□□□□□ -1.79
CDC39P25655 PRD1YCL057W 2139 nt3.84□□□□□ -1.79
CDC39P25655 CPS1YJL172W 1731 nt3.84□□□□□ -1.79
CDC39P25655 FOX2YKR009C 2703 nt3.84□□□□□ -1.79
CDC39P25655 SEC18YBR080C 2277 nt3.84□□□□□ -1.79
CDC39P25655 YFT2YDR319C 825 nt3.84□□□□□ -1.79
CDC39P25655 YGL072CYGL072C 360 nt3.84□□□□□ -1.79
CDC39P25655 NAT2YGR147C 867 nt3.84□□□□□ -1.79
CDC39P25655 RPS4BYHR203C 786 nt3.84□□□□□ -1.79
CDC39P25655 RPS4AYJR145C 786 nt3.84□□□□□ -1.79
CDC39P25655 MAL13YGR288W 1422 nt3.84□□□□□ -1.79
CDC39P25655 RAD52YML032C 1416 nt3.84□□□□□ -1.79
CDC39P25655 MOT2YER068W 1764 nt3.84□□□□□ -1.8
CDC39P25655 OCA4YCR095C 1089 nt3.83□□□□□ -1.8
CDC39P25655 SPS22YCL048W 1392 nt3.83□□□□□ -1.8
CDC39P25655 MAK32YCR019W 1092 nt3.83□□□□□ -1.8
CDC39P25655 RPC53YDL150W 1269 nt3.83□□□□□ -1.8
CDC39P25655 SIT1YEL065W 1887 nt3.83□□□□□ -1.8
CDC39P25655 BUD14YAR014C 2130 nt3.83□□□□□ -1.8
CDC39P25655 VPS72YDR485C 2388 nt3.83□□□□□ -1.8
Retrieved 100 of 7,029 protein–RNA pairs in 17 ms