Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RAB3BP20337 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAB3BP20337 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RAB3BP20337 METRNL-202ENST00000570778 967 ntTSL 5 BASIC19.92■□□□□ 0.78
RAB3BP20337 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
RAB3BP20337 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
RAB3BP20337 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RAB3BP20337 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAB3BP20337 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.92■□□□□ 0.78
RAB3BP20337 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAB3BP20337 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAB3BP20337 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAB3BP20337 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAB3BP20337 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAB3BP20337 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.91■□□□□ 0.78
RAB3BP20337 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAB3BP20337 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.91■□□□□ 0.78
RAB3BP20337 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAB3BP20337 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC19.91■□□□□ 0.78
RAB3BP20337 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAB3BP20337 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC19.91■□□□□ 0.78
RAB3BP20337 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAB3BP20337 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RAB3BP20337 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAB3BP20337 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAB3BP20337 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAB3BP20337 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAB3BP20337 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RAB3BP20337 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAB3BP20337 GDI1-215ENST00000630693 786 ntTSL 4 BASIC19.9■□□□□ 0.78
RAB3BP20337 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RAB3BP20337 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAB3BP20337 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAB3BP20337 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
RAB3BP20337 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.9■□□□□ 0.78
RAB3BP20337 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RAB3BP20337 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.9■□□□□ 0.78
RAB3BP20337 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAB3BP20337 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RAB3BP20337 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RAB3BP20337 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RAB3BP20337 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RAB3BP20337 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
RAB3BP20337 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
RAB3BP20337 RPS2P35-201ENST00000443417 897 ntBASIC19.89■□□□□ 0.77
RAB3BP20337 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC19.89■□□□□ 0.77
RAB3BP20337 AC093536.1-201ENST00000569153 554 ntBASIC19.89■□□□□ 0.77
RAB3BP20337 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC19.89■□□□□ 0.77
RAB3BP20337 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RAB3BP20337 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RAB3BP20337 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
RAB3BP20337 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RAB3BP20337 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.88■□□□□ 0.77
RAB3BP20337 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RAB3BP20337 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RAB3BP20337 MIR3648-2-201ENST00000581792 180 ntBASIC19.88■□□□□ 0.77
RAB3BP20337 MIR3648-1-201ENST00000615959 180 ntBASIC19.88■□□□□ 0.77
RAB3BP20337 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RAB3BP20337 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
RAB3BP20337 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RAB3BP20337 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RAB3BP20337 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.88■□□□□ 0.77
RAB3BP20337 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RAB3BP20337 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
RAB3BP20337 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.88■□□□□ 0.77
RAB3BP20337 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RAB3BP20337 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RAB3BP20337 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RAB3BP20337 AL161729.1-201ENST00000604104 1402 ntBASIC19.87■□□□□ 0.77
RAB3BP20337 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.87■□□□□ 0.77
RAB3BP20337 AC092296.2-201ENST00000589470 999 ntBASIC19.87■□□□□ 0.77
RAB3BP20337 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC19.87■□□□□ 0.77
RAB3BP20337 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RAB3BP20337 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
RAB3BP20337 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.87■□□□□ 0.77
RAB3BP20337 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RAB3BP20337 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RAB3BP20337 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAB3BP20337 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RAB3BP20337 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAB3BP20337 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
RAB3BP20337 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAB3BP20337 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAB3BP20337 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.86■□□□□ 0.77
RAB3BP20337 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAB3BP20337 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.86■□□□□ 0.77
RAB3BP20337 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAB3BP20337 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAB3BP20337 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAB3BP20337 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.85■□□□□ 0.77
RAB3BP20337 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAB3BP20337 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RAB3BP20337 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAB3BP20337 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
RAB3BP20337 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
RAB3BP20337 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
RAB3BP20337 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAB3BP20337 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAB3BP20337 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.85■□□□□ 0.77
RAB3BP20337 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms