Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ATF4P18848 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ATF4P18848 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.86■□□□□ 0.61
ATF4P18848 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
ATF4P18848 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ATF4P18848 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC18.85■□□□□ 0.61
ATF4P18848 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ATF4P18848 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ATF4P18848 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
ATF4P18848 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ATF4P18848 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ATF4P18848 GDI1-215ENST00000630693 786 ntTSL 4 BASIC18.85■□□□□ 0.61
ATF4P18848 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ATF4P18848 LINC00526-201ENST00000581067 1875 ntBASIC18.85■□□□□ 0.61
ATF4P18848 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ATF4P18848 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
ATF4P18848 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.85■□□□□ 0.61
ATF4P18848 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ATF4P18848 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
ATF4P18848 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ATF4P18848 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ATF4P18848 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
ATF4P18848 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC18.85■□□□□ 0.61
ATF4P18848 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATF4P18848 NFE2L3P1-201ENST00000588207 1959 ntBASIC18.84■□□□□ 0.61
ATF4P18848 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
ATF4P18848 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ATF4P18848 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ATF4P18848 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATF4P18848 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATF4P18848 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
ATF4P18848 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATF4P18848 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC18.84■□□□□ 0.61
ATF4P18848 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
ATF4P18848 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATF4P18848 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC18.84■□□□□ 0.61
ATF4P18848 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATF4P18848 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATF4P18848 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATF4P18848 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
ATF4P18848 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.83■□□□□ 0.61
ATF4P18848 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
ATF4P18848 AC142472.1-201ENST00000612013 1741 ntBASIC18.83■□□□□ 0.61
ATF4P18848 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.83■□□□□ 0.61
ATF4P18848 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.83■□□□□ 0.6
ATF4P18848 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
ATF4P18848 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ATF4P18848 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
ATF4P18848 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.82■□□□□ 0.6
ATF4P18848 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ATF4P18848 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC18.82■□□□□ 0.6
ATF4P18848 RPS2-202ENST00000526522 924 ntTSL 2 BASIC18.82■□□□□ 0.6
ATF4P18848 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATF4P18848 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ATF4P18848 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATF4P18848 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
ATF4P18848 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATF4P18848 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATF4P18848 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.81■□□□□ 0.6
ATF4P18848 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
ATF4P18848 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
ATF4P18848 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC18.81■□□□□ 0.6
ATF4P18848 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC18.81■□□□□ 0.6
ATF4P18848 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATF4P18848 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATF4P18848 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.81■□□□□ 0.6
ATF4P18848 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATF4P18848 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATF4P18848 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
ATF4P18848 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATF4P18848 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATF4P18848 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATF4P18848 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATF4P18848 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATF4P18848 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.8■□□□□ 0.6
ATF4P18848 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC18.8■□□□□ 0.6
ATF4P18848 RPS2-210ENST00000530225 765 ntTSL 2 BASIC18.8■□□□□ 0.6
ATF4P18848 AC016575.1-201ENST00000607026 382 ntBASIC18.8■□□□□ 0.6
ATF4P18848 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATF4P18848 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATF4P18848 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC18.8■□□□□ 0.6
ATF4P18848 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
ATF4P18848 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ATF4P18848 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
ATF4P18848 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATF4P18848 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
ATF4P18848 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATF4P18848 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
ATF4P18848 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATF4P18848 CR559946.2-201ENST00000623684 991 ntBASIC18.79■□□□□ 0.6
ATF4P18848 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
ATF4P18848 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC18.79■□□□□ 0.6
ATF4P18848 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC18.79■□□□□ 0.6
ATF4P18848 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATF4P18848 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATF4P18848 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ATF4P18848 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATF4P18848 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ATF4P18848 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATF4P18848 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms