Protein–RNA interactions for Protein: P18077

RPL35A, 60S ribosomal protein L35a, humanhuman

Known RBP Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL35AP18077 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
RPL35AP18077 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
RPL35AP18077 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RPL35AP18077 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
RPL35AP18077 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RPL35AP18077 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RPL35AP18077 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RPL35AP18077 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC16.89■□□□□ 0.29
RPL35AP18077 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC16.89■□□□□ 0.29
RPL35AP18077 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
RPL35AP18077 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RPL35AP18077 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
RPL35AP18077 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RPL35AP18077 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
RPL35AP18077 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RPL35AP18077 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC16.88■□□□□ 0.29
RPL35AP18077 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPL35AP18077 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC16.88■□□□□ 0.29
RPL35AP18077 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC16.88■□□□□ 0.29
RPL35AP18077 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC16.88■□□□□ 0.29
RPL35AP18077 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPL35AP18077 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPL35AP18077 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC16.88■□□□□ 0.29
RPL35AP18077 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
RPL35AP18077 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPL35AP18077 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC16.87■□□□□ 0.29
RPL35AP18077 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPL35AP18077 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPL35AP18077 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC16.87■□□□□ 0.29
RPL35AP18077 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPL35AP18077 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPL35AP18077 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC16.87■□□□□ 0.29
RPL35AP18077 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC16.87■□□□□ 0.29
RPL35AP18077 AC005703.6-201ENST00000623265 1329 ntBASIC16.87■□□□□ 0.29
RPL35AP18077 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPL35AP18077 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC16.87■□□□□ 0.29
RPL35AP18077 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
RPL35AP18077 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RPL35AP18077 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RPL35AP18077 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
RPL35AP18077 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC16.86■□□□□ 0.29
RPL35AP18077 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC16.86■□□□□ 0.29
RPL35AP18077 RPP21-222ENST00000433076 577 ntTSL 2 BASIC16.86■□□□□ 0.29
RPL35AP18077 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC16.86■□□□□ 0.29
RPL35AP18077 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC16.86■□□□□ 0.29
RPL35AP18077 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
RPL35AP18077 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC16.86■□□□□ 0.29
RPL35AP18077 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC16.86■□□□□ 0.29
RPL35AP18077 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RPL35AP18077 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
RPL35AP18077 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RPL35AP18077 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RPL35AP18077 LINC01124-201ENST00000409786 2117 ntBASIC16.85■□□□□ 0.29
RPL35AP18077 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC16.85■□□□□ 0.29
RPL35AP18077 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RPL35AP18077 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RPL35AP18077 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RPL35AP18077 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC16.85■□□□□ 0.29
RPL35AP18077 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RPL35AP18077 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC16.85■□□□□ 0.29
RPL35AP18077 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC16.85■□□□□ 0.29
RPL35AP18077 MIR3621-201ENST00000580529 85 ntBASIC16.85■□□□□ 0.29
RPL35AP18077 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RPL35AP18077 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RPL35AP18077 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RPL35AP18077 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC16.85■□□□□ 0.29
RPL35AP18077 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC16.84■□□□□ 0.29
RPL35AP18077 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RPL35AP18077 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC16.84■□□□□ 0.29
RPL35AP18077 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC16.84■□□□□ 0.29
RPL35AP18077 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
RPL35AP18077 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RPL35AP18077 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPL35AP18077 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
RPL35AP18077 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RPL35AP18077 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RPL35AP18077 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RPL35AP18077 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RPL35AP18077 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC16.83■□□□□ 0.28
RPL35AP18077 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
RPL35AP18077 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RPL35AP18077 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RPL35AP18077 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC16.83■□□□□ 0.28
RPL35AP18077 EED-207ENST00000528180 1745 ntTSL 5 BASIC16.83■□□□□ 0.28
RPL35AP18077 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC16.83■□□□□ 0.28
RPL35AP18077 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC16.83■□□□□ 0.28
RPL35AP18077 CD37-213ENST00000598095 1598 ntTSL 2 BASIC16.83■□□□□ 0.28
RPL35AP18077 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RPL35AP18077 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC16.83■□□□□ 0.28
RPL35AP18077 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC16.83■□□□□ 0.28
RPL35AP18077 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC16.83■□□□□ 0.28
RPL35AP18077 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RPL35AP18077 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RPL35AP18077 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC16.82■□□□□ 0.28
RPL35AP18077 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
RPL35AP18077 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
RPL35AP18077 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
RPL35AP18077 AL161729.1-201ENST00000604104 1402 ntBASIC16.82■□□□□ 0.28
RPL35AP18077 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RPL35AP18077 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms