Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
UBL4AP11441 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
UBL4AP11441 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
UBL4AP11441 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UBL4AP11441 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
UBL4AP11441 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UBL4AP11441 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.97■□□□□ 0.95
UBL4AP11441 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.97■□□□□ 0.95
UBL4AP11441 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
UBL4AP11441 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UBL4AP11441 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
UBL4AP11441 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
UBL4AP11441 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
UBL4AP11441 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
UBL4AP11441 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UBL4AP11441 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
UBL4AP11441 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UBL4AP11441 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UBL4AP11441 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UBL4AP11441 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.97■□□□□ 0.95
UBL4AP11441 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
UBL4AP11441 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
UBL4AP11441 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
UBL4AP11441 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
UBL4AP11441 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
UBL4AP11441 AC004448.1-201ENST00000458332 883 ntBASIC20.96■□□□□ 0.95
UBL4AP11441 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.96■□□□□ 0.95
UBL4AP11441 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.96■□□□□ 0.95
UBL4AP11441 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
UBL4AP11441 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.96■□□□□ 0.95
UBL4AP11441 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
UBL4AP11441 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
UBL4AP11441 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
UBL4AP11441 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.96■□□□□ 0.95
UBL4AP11441 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
UBL4AP11441 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.95■□□□□ 0.94
UBL4AP11441 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
UBL4AP11441 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
UBL4AP11441 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
UBL4AP11441 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
UBL4AP11441 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
UBL4AP11441 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
UBL4AP11441 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.95■□□□□ 0.94
UBL4AP11441 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
UBL4AP11441 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.95■□□□□ 0.94
UBL4AP11441 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
UBL4AP11441 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
UBL4AP11441 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
UBL4AP11441 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
UBL4AP11441 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.94■□□□□ 0.94
UBL4AP11441 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
UBL4AP11441 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.94■□□□□ 0.94
UBL4AP11441 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.94■□□□□ 0.94
UBL4AP11441 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.94■□□□□ 0.94
UBL4AP11441 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
UBL4AP11441 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.94■□□□□ 0.94
UBL4AP11441 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
UBL4AP11441 AC079834.2-201ENST00000609776 1949 ntBASIC20.94■□□□□ 0.94
UBL4AP11441 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
UBL4AP11441 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.93■□□□□ 0.94
UBL4AP11441 ALDH1A3-203ENST00000557963 1670 ntBASIC20.93■□□□□ 0.94
UBL4AP11441 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
UBL4AP11441 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
UBL4AP11441 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
UBL4AP11441 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
UBL4AP11441 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.93■□□□□ 0.94
UBL4AP11441 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
UBL4AP11441 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
UBL4AP11441 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
UBL4AP11441 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
UBL4AP11441 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
UBL4AP11441 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
UBL4AP11441 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
UBL4AP11441 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.92■□□□□ 0.94
UBL4AP11441 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
UBL4AP11441 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
UBL4AP11441 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
UBL4AP11441 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
UBL4AP11441 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
UBL4AP11441 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.92■□□□□ 0.94
UBL4AP11441 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.92■□□□□ 0.94
UBL4AP11441 AL451085.2-201ENST00000605085 799 ntBASIC20.92■□□□□ 0.94
UBL4AP11441 AC021242.3-201ENST00000607598 1377 ntBASIC20.92■□□□□ 0.94
UBL4AP11441 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.92■□□□□ 0.94
UBL4AP11441 AC012676.1-201ENST00000574705 1949 ntBASIC20.92■□□□□ 0.94
UBL4AP11441 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
UBL4AP11441 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
UBL4AP11441 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
UBL4AP11441 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
UBL4AP11441 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
UBL4AP11441 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
UBL4AP11441 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.91■□□□□ 0.94
UBL4AP11441 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
UBL4AP11441 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.91■□□□□ 0.94
UBL4AP11441 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
UBL4AP11441 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
UBL4AP11441 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
UBL4AP11441 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.91■□□□□ 0.94
UBL4AP11441 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.91■□□□□ 0.94
UBL4AP11441 SNX5-217ENST00000606557 1087 ntBASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms