Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.76■□□□□ 0.91
FREM3P0C091 MIR6722-201ENST00000617286 78 ntBASIC20.76■□□□□ 0.91
FREM3P0C091 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
FREM3P0C091 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
FREM3P0C091 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.75■□□□□ 0.91
FREM3P0C091 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
FREM3P0C091 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.75■□□□□ 0.91
FREM3P0C091 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
FREM3P0C091 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
FREM3P0C091 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.75■□□□□ 0.91
FREM3P0C091 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
FREM3P0C091 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
FREM3P0C091 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
FREM3P0C091 AL022069.1-201ENST00000568025 1636 ntBASIC20.74■□□□□ 0.91
FREM3P0C091 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.74■□□□□ 0.91
FREM3P0C091 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
FREM3P0C091 HLA-L-211ENST00000482052 1765 ntBASIC20.74■□□□□ 0.91
FREM3P0C091 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
FREM3P0C091 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
FREM3P0C091 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.74■□□□□ 0.91
FREM3P0C091 SUDS3P1-201ENST00000505831 966 ntBASIC20.74■□□□□ 0.91
FREM3P0C091 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
FREM3P0C091 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.73■□□□□ 0.91
FREM3P0C091 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
FREM3P0C091 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
FREM3P0C091 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.73■□□□□ 0.91
FREM3P0C091 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
FREM3P0C091 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
FREM3P0C091 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
FREM3P0C091 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
FREM3P0C091 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
FREM3P0C091 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.73■□□□□ 0.91
FREM3P0C091 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.73■□□□□ 0.91
FREM3P0C091 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.72■□□□□ 0.91
FREM3P0C091 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
FREM3P0C091 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FREM3P0C091 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FREM3P0C091 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.72■□□□□ 0.91
FREM3P0C091 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
FREM3P0C091 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
FREM3P0C091 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
FREM3P0C091 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.72■□□□□ 0.91
FREM3P0C091 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
FREM3P0C091 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
FREM3P0C091 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.71■□□□□ 0.91
FREM3P0C091 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
FREM3P0C091 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
FREM3P0C091 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.71■□□□□ 0.91
FREM3P0C091 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.71■□□□□ 0.91
FREM3P0C091 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
FREM3P0C091 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
FREM3P0C091 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.71■□□□□ 0.91
FREM3P0C091 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
FREM3P0C091 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.7■□□□□ 0.9
FREM3P0C091 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
FREM3P0C091 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
FREM3P0C091 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.7■□□□□ 0.9
FREM3P0C091 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
FREM3P0C091 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
FREM3P0C091 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
FREM3P0C091 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
FREM3P0C091 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
FREM3P0C091 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
FREM3P0C091 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
FREM3P0C091 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FREM3P0C091 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.7■□□□□ 0.9
FREM3P0C091 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.69■□□□□ 0.9
FREM3P0C091 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.69■□□□□ 0.9
FREM3P0C091 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.69■□□□□ 0.9
FREM3P0C091 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.69■□□□□ 0.9
FREM3P0C091 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FREM3P0C091 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
FREM3P0C091 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
FREM3P0C091 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FREM3P0C091 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FREM3P0C091 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
FREM3P0C091 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FREM3P0C091 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
FREM3P0C091 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.69■□□□□ 0.9
FREM3P0C091 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.69■□□□□ 0.9
FREM3P0C091 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.69■□□□□ 0.9
FREM3P0C091 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FREM3P0C091 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.69■□□□□ 0.9
FREM3P0C091 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
FREM3P0C091 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
FREM3P0C091 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
FREM3P0C091 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FREM3P0C091 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FREM3P0C091 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.68■□□□□ 0.9
FREM3P0C091 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
FREM3P0C091 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
FREM3P0C091 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
FREM3P0C091 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
FREM3P0C091 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FREM3P0C091 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.68■□□□□ 0.9
FREM3P0C091 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.68■□□□□ 0.9
FREM3P0C091 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
FREM3P0C091 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FREM3P0C091 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.68■□□□□ 0.9
FREM3P0C091 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms