Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC17.63■□□□□ 0.41
CXCL1P09341 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CXCL1P09341 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CXCL1P09341 DUX4L29-201ENST00000425409 679 ntBASIC17.63■□□□□ 0.41
CXCL1P09341 NRG1-221ENST00000614767 762 ntTSL 5 BASIC17.63■□□□□ 0.41
CXCL1P09341 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CXCL1P09341 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CXCL1P09341 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CXCL1P09341 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CXCL1P09341 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC17.63■□□□□ 0.41
CXCL1P09341 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CXCL1P09341 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CXCL1P09341 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CXCL1P09341 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CXCL1P09341 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
CXCL1P09341 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CXCL1P09341 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC17.62■□□□□ 0.41
CXCL1P09341 AL391422.3-201ENST00000603791 2761 ntBASIC17.62■□□□□ 0.41
CXCL1P09341 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CXCL1P09341 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CXCL1P09341 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CXCL1P09341 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CXCL1P09341 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CXCL1P09341 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CXCL1P09341 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CXCL1P09341 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CXCL1P09341 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CXCL1P09341 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CXCL1P09341 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CXCL1P09341 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CXCL1P09341 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CXCL1P09341 AL162393.1-201ENST00000437852 946 ntBASIC17.61■□□□□ 0.41
CXCL1P09341 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CXCL1P09341 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CXCL1P09341 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CXCL1P09341 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CXCL1P09341 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CXCL1P09341 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CXCL1P09341 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CXCL1P09341 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.6■□□□□ 0.41
CXCL1P09341 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
CXCL1P09341 CHML-204ENST00000638121 920 ntTSL 2 BASIC17.6■□□□□ 0.41
CXCL1P09341 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CXCL1P09341 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
CXCL1P09341 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC17.6■□□□□ 0.41
CXCL1P09341 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CXCL1P09341 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CXCL1P09341 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CXCL1P09341 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CXCL1P09341 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CXCL1P09341 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CXCL1P09341 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CXCL1P09341 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CXCL1P09341 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
CXCL1P09341 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC17.59■□□□□ 0.41
CXCL1P09341 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CXCL1P09341 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC17.59■□□□□ 0.41
CXCL1P09341 ANOS2P-203ENST00000472227 1816 ntBASIC17.58■□□□□ 0.41
CXCL1P09341 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC17.58■□□□□ 0.41
CXCL1P09341 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC17.58■□□□□ 0.41
CXCL1P09341 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
CXCL1P09341 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CXCL1P09341 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CXCL1P09341 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CXCL1P09341 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CXCL1P09341 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CXCL1P09341 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CXCL1P09341 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CXCL1P09341 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC17.58■□□□□ 0.4
CXCL1P09341 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CXCL1P09341 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC17.58■□□□□ 0.4
CXCL1P09341 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC17.57■□□□□ 0.4
CXCL1P09341 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC17.57■□□□□ 0.4
CXCL1P09341 MIR219A2-201ENST00000608502 1504 ntBASIC17.57■□□□□ 0.4
CXCL1P09341 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CXCL1P09341 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CXCL1P09341 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.57■□□□□ 0.4
CXCL1P09341 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CXCL1P09341 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CXCL1P09341 AC242852.2-201ENST00000615738 1807 ntBASIC17.57■□□□□ 0.4
CXCL1P09341 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CXCL1P09341 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CXCL1P09341 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CXCL1P09341 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CXCL1P09341 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CXCL1P09341 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CXCL1P09341 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CXCL1P09341 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CXCL1P09341 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
CXCL1P09341 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CXCL1P09341 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC17.56■□□□□ 0.4
CXCL1P09341 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CXCL1P09341 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC17.56■□□□□ 0.4
CXCL1P09341 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CXCL1P09341 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CXCL1P09341 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CXCL1P09341 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CXCL1P09341 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CXCL1P09341 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CXCL1P09341 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms