Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC20.59■□□□□ 0.89
HMGN1P05114 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
HMGN1P05114 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
HMGN1P05114 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HMGN1P05114 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HMGN1P05114 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HMGN1P05114 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HMGN1P05114 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HMGN1P05114 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.58■□□□□ 0.89
HMGN1P05114 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HMGN1P05114 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HMGN1P05114 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
HMGN1P05114 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HMGN1P05114 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HMGN1P05114 AC233723.2-201ENST00000623798 2106 ntBASIC20.57■□□□□ 0.88
HMGN1P05114 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HMGN1P05114 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
HMGN1P05114 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.57■□□□□ 0.88
HMGN1P05114 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HMGN1P05114 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
HMGN1P05114 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.57■□□□□ 0.88
HMGN1P05114 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
HMGN1P05114 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
HMGN1P05114 RNF126P1-201ENST00000567452 1320 ntBASIC20.56■□□□□ 0.88
HMGN1P05114 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HMGN1P05114 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
HMGN1P05114 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HMGN1P05114 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HMGN1P05114 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HMGN1P05114 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HMGN1P05114 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HMGN1P05114 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HMGN1P05114 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC20.56■□□□□ 0.88
HMGN1P05114 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
HMGN1P05114 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HMGN1P05114 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
HMGN1P05114 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HMGN1P05114 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HMGN1P05114 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HMGN1P05114 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HMGN1P05114 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HMGN1P05114 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
HMGN1P05114 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HMGN1P05114 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.55■□□□□ 0.88
HMGN1P05114 AL592293.1-201ENST00000502889 1188 ntBASIC20.55■□□□□ 0.88
HMGN1P05114 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
HMGN1P05114 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
HMGN1P05114 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
HMGN1P05114 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.54■□□□□ 0.88
HMGN1P05114 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
HMGN1P05114 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HMGN1P05114 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HMGN1P05114 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HMGN1P05114 MIR6765-201ENST00000614092 87 ntBASIC20.54■□□□□ 0.88
HMGN1P05114 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
HMGN1P05114 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HMGN1P05114 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
HMGN1P05114 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HMGN1P05114 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
HMGN1P05114 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HMGN1P05114 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
HMGN1P05114 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HMGN1P05114 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HMGN1P05114 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HMGN1P05114 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HMGN1P05114 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.53■□□□□ 0.88
HMGN1P05114 SPCS2P3-201ENST00000500401 656 ntBASIC20.53■□□□□ 0.88
HMGN1P05114 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
HMGN1P05114 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
HMGN1P05114 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HMGN1P05114 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HMGN1P05114 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.53■□□□□ 0.88
HMGN1P05114 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HMGN1P05114 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.52■□□□□ 0.88
HMGN1P05114 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.52■□□□□ 0.88
HMGN1P05114 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HMGN1P05114 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HMGN1P05114 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HMGN1P05114 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
HMGN1P05114 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.52■□□□□ 0.88
HMGN1P05114 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
HMGN1P05114 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HMGN1P05114 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.52■□□□□ 0.88
HMGN1P05114 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.52■□□□□ 0.88
HMGN1P05114 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HMGN1P05114 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HMGN1P05114 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HMGN1P05114 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.51■□□□□ 0.87
HMGN1P05114 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HMGN1P05114 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.51■□□□□ 0.87
HMGN1P05114 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
HMGN1P05114 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
HMGN1P05114 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HMGN1P05114 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HMGN1P05114 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HMGN1P05114 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.5■□□□□ 0.87
HMGN1P05114 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
HMGN1P05114 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.5■□□□□ 0.87
HMGN1P05114 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC20.5■□□□□ 0.87
HMGN1P05114 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 159.7 ms