Protein–RNA interactions for Protein: O95833

CLIC3, Chloride intracellular channel protein 3, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3O95833 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.04■□□□□ 0.96
CLIC3O95833 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.04■□□□□ 0.96
CLIC3O95833 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.03■□□□□ 0.96
CLIC3O95833 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLIC3O95833 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.03■□□□□ 0.96
CLIC3O95833 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.03■□□□□ 0.96
CLIC3O95833 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CLIC3O95833 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CLIC3O95833 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.03■□□□□ 0.96
CLIC3O95833 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLIC3O95833 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLIC3O95833 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CLIC3O95833 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLIC3O95833 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CLIC3O95833 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLIC3O95833 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CLIC3O95833 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLIC3O95833 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.02■□□□□ 0.95
CLIC3O95833 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
CLIC3O95833 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.01■□□□□ 0.95
CLIC3O95833 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLIC3O95833 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
CLIC3O95833 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC21.01■□□□□ 0.95
CLIC3O95833 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLIC3O95833 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLIC3O95833 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.01■□□□□ 0.95
CLIC3O95833 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
CLIC3O95833 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLIC3O95833 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLIC3O95833 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLIC3O95833 SLC25A24-204ENST00000569674 2357 ntBASIC21.01■□□□□ 0.95
CLIC3O95833 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLIC3O95833 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CLIC3O95833 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLIC3O95833 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLIC3O95833 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CLIC3O95833 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21■□□□□ 0.95
CLIC3O95833 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CLIC3O95833 DUX4L11-201ENST00000611504 1267 ntBASIC21■□□□□ 0.95
CLIC3O95833 DUX4L12-201ENST00000614593 1267 ntBASIC21■□□□□ 0.95
CLIC3O95833 DUX4L14-201ENST00000621227 1267 ntBASIC21■□□□□ 0.95
CLIC3O95833 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21■□□□□ 0.95
CLIC3O95833 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLIC3O95833 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLIC3O95833 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLIC3O95833 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CLIC3O95833 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLIC3O95833 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
CLIC3O95833 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLIC3O95833 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC20.99■□□□□ 0.95
CLIC3O95833 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.99■□□□□ 0.95
CLIC3O95833 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.99■□□□□ 0.95
CLIC3O95833 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLIC3O95833 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLIC3O95833 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLIC3O95833 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.98■□□□□ 0.95
CLIC3O95833 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.98■□□□□ 0.95
CLIC3O95833 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CLIC3O95833 MLEC-202ENST00000412616 841 ntTSL 3 BASIC20.98■□□□□ 0.95
CLIC3O95833 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CLIC3O95833 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.98■□□□□ 0.95
CLIC3O95833 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CLIC3O95833 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLIC3O95833 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.98■□□□□ 0.95
CLIC3O95833 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
CLIC3O95833 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CLIC3O95833 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CLIC3O95833 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CLIC3O95833 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLIC3O95833 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.97■□□□□ 0.95
CLIC3O95833 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CLIC3O95833 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLIC3O95833 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.97■□□□□ 0.95
CLIC3O95833 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.97■□□□□ 0.95
CLIC3O95833 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.97■□□□□ 0.95
CLIC3O95833 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
CLIC3O95833 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.97■□□□□ 0.95
CLIC3O95833 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLIC3O95833 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLIC3O95833 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.96■□□□□ 0.95
CLIC3O95833 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLIC3O95833 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLIC3O95833 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLIC3O95833 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.96■□□□□ 0.95
CLIC3O95833 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.96■□□□□ 0.95
CLIC3O95833 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLIC3O95833 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLIC3O95833 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLIC3O95833 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLIC3O95833 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.95
CLIC3O95833 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.95■□□□□ 0.94
CLIC3O95833 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLIC3O95833 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.95■□□□□ 0.94
CLIC3O95833 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.95■□□□□ 0.94
CLIC3O95833 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.95■□□□□ 0.94
CLIC3O95833 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.95■□□□□ 0.94
CLIC3O95833 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CLIC3O95833 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.95■□□□□ 0.94
CLIC3O95833 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.95■□□□□ 0.94
CLIC3O95833 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms