Protein–RNA interactions for Protein: O95716

RAB3D, Ras-related protein Rab-3D, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3DO95716 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC19.33■□□□□ 0.68
RAB3DO95716 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.33■□□□□ 0.68
RAB3DO95716 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RAB3DO95716 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RAB3DO95716 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RAB3DO95716 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB3DO95716 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RAB3DO95716 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB3DO95716 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.32■□□□□ 0.68
RAB3DO95716 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.32■□□□□ 0.68
RAB3DO95716 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RAB3DO95716 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB3DO95716 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB3DO95716 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB3DO95716 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC19.32■□□□□ 0.68
RAB3DO95716 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB3DO95716 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC19.32■□□□□ 0.68
RAB3DO95716 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB3DO95716 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RAB3DO95716 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RAB3DO95716 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
RAB3DO95716 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.31■□□□□ 0.68
RAB3DO95716 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC19.31■□□□□ 0.68
RAB3DO95716 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAB3DO95716 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.31■□□□□ 0.68
RAB3DO95716 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RAB3DO95716 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.31■□□□□ 0.68
RAB3DO95716 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAB3DO95716 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
RAB3DO95716 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
RAB3DO95716 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB3DO95716 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB3DO95716 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB3DO95716 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB3DO95716 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.3■□□□□ 0.68
RAB3DO95716 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.3■□□□□ 0.68
RAB3DO95716 AGPS-202ENST00000409888 815 ntTSL 4 BASIC19.3■□□□□ 0.68
RAB3DO95716 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC19.3■□□□□ 0.68
RAB3DO95716 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
RAB3DO95716 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
RAB3DO95716 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RAB3DO95716 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB3DO95716 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
RAB3DO95716 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
RAB3DO95716 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RAB3DO95716 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB3DO95716 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB3DO95716 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB3DO95716 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB3DO95716 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RAB3DO95716 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.29■□□□□ 0.68
RAB3DO95716 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RAB3DO95716 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.29■□□□□ 0.68
RAB3DO95716 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RAB3DO95716 SMPD5-203ENST00000639008 1464 ntBASIC19.28■□□□□ 0.68
RAB3DO95716 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB3DO95716 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.28■□□□□ 0.68
RAB3DO95716 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
RAB3DO95716 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RAB3DO95716 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.28■□□□□ 0.68
RAB3DO95716 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
RAB3DO95716 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
RAB3DO95716 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
RAB3DO95716 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RAB3DO95716 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RAB3DO95716 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC19.28■□□□□ 0.68
RAB3DO95716 MOB2-207ENST00000614710 705 ntTSL 5 BASIC19.28■□□□□ 0.68
RAB3DO95716 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
RAB3DO95716 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB3DO95716 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.28■□□□□ 0.68
RAB3DO95716 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB3DO95716 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RAB3DO95716 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RAB3DO95716 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RAB3DO95716 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC19.27■□□□□ 0.68
RAB3DO95716 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RAB3DO95716 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RAB3DO95716 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RAB3DO95716 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
RAB3DO95716 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB3DO95716 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.26■□□□□ 0.67
RAB3DO95716 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB3DO95716 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB3DO95716 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.26■□□□□ 0.67
RAB3DO95716 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB3DO95716 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RAB3DO95716 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC19.26■□□□□ 0.67
RAB3DO95716 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.26■□□□□ 0.67
RAB3DO95716 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB3DO95716 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB3DO95716 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.25■□□□□ 0.67
RAB3DO95716 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB3DO95716 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RAB3DO95716 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.25■□□□□ 0.67
RAB3DO95716 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.25■□□□□ 0.67
RAB3DO95716 RNF166-209ENST00000567844 633 ntTSL 5 BASIC19.25■□□□□ 0.67
RAB3DO95716 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
RAB3DO95716 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAB3DO95716 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RAB3DO95716 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms