Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SNX4O95219 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.22■□□□□ 0.99
SNX4O95219 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SNX4O95219 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SNX4O95219 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.22■□□□□ 0.99
SNX4O95219 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.22■□□□□ 0.99
SNX4O95219 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SNX4O95219 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SNX4O95219 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
SNX4O95219 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.22■□□□□ 0.99
SNX4O95219 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SNX4O95219 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SNX4O95219 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.21■□□□□ 0.99
SNX4O95219 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.21■□□□□ 0.99
SNX4O95219 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SNX4O95219 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SNX4O95219 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SNX4O95219 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.21■□□□□ 0.99
SNX4O95219 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SNX4O95219 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.21■□□□□ 0.99
SNX4O95219 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.21■□□□□ 0.99
SNX4O95219 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.21■□□□□ 0.99
SNX4O95219 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.21■□□□□ 0.99
SNX4O95219 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.21■□□□□ 0.99
SNX4O95219 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
SNX4O95219 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SNX4O95219 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SNX4O95219 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
SNX4O95219 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
SNX4O95219 DUSP8P5-201ENST00000422884 1815 ntBASIC21.2■□□□□ 0.98
SNX4O95219 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
SNX4O95219 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.2■□□□□ 0.98
SNX4O95219 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SNX4O95219 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.2■□□□□ 0.98
SNX4O95219 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.2■□□□□ 0.98
SNX4O95219 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.2■□□□□ 0.98
SNX4O95219 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
SNX4O95219 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.2■□□□□ 0.98
SNX4O95219 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SNX4O95219 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SNX4O95219 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SNX4O95219 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SNX4O95219 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SNX4O95219 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
SNX4O95219 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SNX4O95219 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.19■□□□□ 0.98
SNX4O95219 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
SNX4O95219 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SNX4O95219 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SNX4O95219 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SNX4O95219 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SNX4O95219 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SNX4O95219 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
SNX4O95219 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SNX4O95219 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SNX4O95219 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SNX4O95219 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.18■□□□□ 0.98
SNX4O95219 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.18■□□□□ 0.98
SNX4O95219 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SNX4O95219 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
SNX4O95219 AL356441.2-201ENST00000443009 864 ntBASIC21.17■□□□□ 0.98
SNX4O95219 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.17■□□□□ 0.98
SNX4O95219 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.17■□□□□ 0.98
SNX4O95219 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SNX4O95219 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.17■□□□□ 0.98
SNX4O95219 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.17■□□□□ 0.98
SNX4O95219 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
SNX4O95219 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
SNX4O95219 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SNX4O95219 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SNX4O95219 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.17■□□□□ 0.98
SNX4O95219 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SNX4O95219 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SNX4O95219 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SNX4O95219 LINC01124-201ENST00000409786 2117 ntBASIC21.16■□□□□ 0.98
SNX4O95219 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.16■□□□□ 0.98
SNX4O95219 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
SNX4O95219 TSPY9P-201ENST00000440215 945 ntBASIC21.16■□□□□ 0.98
SNX4O95219 TSPY11P-201ENST00000442607 1045 ntBASIC21.16■□□□□ 0.98
SNX4O95219 UNC93B8-201ENST00000511903 705 ntBASIC21.16■□□□□ 0.98
SNX4O95219 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
SNX4O95219 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SNX4O95219 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SNX4O95219 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
SNX4O95219 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
SNX4O95219 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SNX4O95219 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SNX4O95219 KRT16P3-201ENST00000439127 1283 ntBASIC21.15■□□□□ 0.98
SNX4O95219 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.15■□□□□ 0.98
SNX4O95219 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
SNX4O95219 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.15■□□□□ 0.98
SNX4O95219 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.15■□□□□ 0.98
SNX4O95219 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SNX4O95219 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
SNX4O95219 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SNX4O95219 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.14■□□□□ 0.97
SNX4O95219 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SNX4O95219 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.14■□□□□ 0.97
SNX4O95219 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.14■□□□□ 0.97
SNX4O95219 AP003733.4-201ENST00000623785 1697 ntBASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms