Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC22.89■■□□□ 1.25
RFPL1O75677 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.25
RFPL1O75677 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC22.89■■□□□ 1.25
RFPL1O75677 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RFPL1O75677 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC22.88■■□□□ 1.25
RFPL1O75677 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
RFPL1O75677 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC22.88■■□□□ 1.25
RFPL1O75677 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC22.88■■□□□ 1.25
RFPL1O75677 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RFPL1O75677 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
RFPL1O75677 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RFPL1O75677 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC22.88■■□□□ 1.25
RFPL1O75677 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC22.88■■□□□ 1.25
RFPL1O75677 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC22.88■■□□□ 1.25
RFPL1O75677 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC22.88■■□□□ 1.25
RFPL1O75677 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
RFPL1O75677 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
RFPL1O75677 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
RFPL1O75677 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.87■■□□□ 1.25
RFPL1O75677 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RFPL1O75677 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RFPL1O75677 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RFPL1O75677 CD37-213ENST00000598095 1598 ntTSL 2 BASIC22.87■■□□□ 1.25
RFPL1O75677 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
RFPL1O75677 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RFPL1O75677 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
RFPL1O75677 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RFPL1O75677 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RFPL1O75677 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC22.86■■□□□ 1.25
RFPL1O75677 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC22.85■■□□□ 1.25
RFPL1O75677 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
RFPL1O75677 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
RFPL1O75677 AC092068.2-201ENST00000590491 1708 ntBASIC22.85■■□□□ 1.25
RFPL1O75677 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
RFPL1O75677 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
RFPL1O75677 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
RFPL1O75677 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
RFPL1O75677 AC103834.1-201ENST00000520383 144 ntBASIC22.85■■□□□ 1.25
RFPL1O75677 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
RFPL1O75677 DUSP8P3-201ENST00000399571 1760 ntBASIC22.85■■□□□ 1.25
RFPL1O75677 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
RFPL1O75677 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
RFPL1O75677 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
RFPL1O75677 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC22.84■■□□□ 1.25
RFPL1O75677 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC22.84■■□□□ 1.25
RFPL1O75677 AL117328.2-201ENST00000624617 1940 ntBASIC22.84■■□□□ 1.25
RFPL1O75677 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
RFPL1O75677 AL161729.1-201ENST00000604104 1402 ntBASIC22.83■■□□□ 1.25
RFPL1O75677 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
RFPL1O75677 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC22.83■■□□□ 1.25
RFPL1O75677 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
RFPL1O75677 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
RFPL1O75677 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
RFPL1O75677 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
RFPL1O75677 HES6-204ENST00000409182 863 ntTSL 2 BASIC22.83■■□□□ 1.25
RFPL1O75677 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
RFPL1O75677 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
RFPL1O75677 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
RFPL1O75677 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.24
RFPL1O75677 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.24
RFPL1O75677 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
RFPL1O75677 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
RFPL1O75677 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
RFPL1O75677 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
RFPL1O75677 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
RFPL1O75677 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
RFPL1O75677 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC22.82■■□□□ 1.24
RFPL1O75677 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
RFPL1O75677 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
RFPL1O75677 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC22.82■■□□□ 1.24
RFPL1O75677 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC22.81■■□□□ 1.24
RFPL1O75677 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC22.81■■□□□ 1.24
RFPL1O75677 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.81■■□□□ 1.24
RFPL1O75677 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
RFPL1O75677 IDNK-203ENST00000405990 629 ntTSL 2 BASIC22.81■■□□□ 1.24
RFPL1O75677 SSSCA1-AS1-201ENST00000567594 614 ntBASIC22.81■■□□□ 1.24
RFPL1O75677 AC087393.1-201ENST00000582896 145 ntBASIC22.81■■□□□ 1.24
RFPL1O75677 MIR4508-201ENST00000584178 70 ntBASIC22.81■■□□□ 1.24
RFPL1O75677 PVT1_1.1-201ENST00000615125 194 ntBASIC22.81■■□□□ 1.24
RFPL1O75677 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC22.81■■□□□ 1.24
RFPL1O75677 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC22.81■■□□□ 1.24
RFPL1O75677 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC22.81■■□□□ 1.24
RFPL1O75677 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
RFPL1O75677 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
RFPL1O75677 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
RFPL1O75677 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
RFPL1O75677 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC22.8■■□□□ 1.24
RFPL1O75677 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
RFPL1O75677 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
RFPL1O75677 AL592295.1-201ENST00000400984 884 ntBASIC22.8■■□□□ 1.24
RFPL1O75677 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
RFPL1O75677 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
RFPL1O75677 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC22.8■■□□□ 1.24
RFPL1O75677 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
RFPL1O75677 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
RFPL1O75677 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
RFPL1O75677 AC233723.2-201ENST00000623798 2106 ntBASIC22.79■■□□□ 1.24
RFPL1O75677 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
RFPL1O75677 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC22.79■■□□□ 1.24
RFPL1O75677 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC22.79■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms