Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 ALDH1A3-203ENST00000557963 1670 ntBASIC21.75■■□□□ 1.07
PCDH7O60245 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDH7O60245 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDH7O60245 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PCDH7O60245 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDH7O60245 AC103724.3-201ENST00000564481 992 ntBASIC21.75■■□□□ 1.07
PCDH7O60245 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
PCDH7O60245 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
PCDH7O60245 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
PCDH7O60245 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PCDH7O60245 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDH7O60245 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.75■■□□□ 1.07
PCDH7O60245 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
PCDH7O60245 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDH7O60245 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDH7O60245 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDH7O60245 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
PCDH7O60245 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.74■■□□□ 1.07
PCDH7O60245 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDH7O60245 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC21.74■■□□□ 1.07
PCDH7O60245 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
PCDH7O60245 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.74■■□□□ 1.07
PCDH7O60245 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.74■■□□□ 1.07
PCDH7O60245 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.74■■□□□ 1.07
PCDH7O60245 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDH7O60245 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
PCDH7O60245 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDH7O60245 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PCDH7O60245 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDH7O60245 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
PCDH7O60245 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PCDH7O60245 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PCDH7O60245 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDH7O60245 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.72■■□□□ 1.07
PCDH7O60245 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDH7O60245 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDH7O60245 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PCDH7O60245 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PCDH7O60245 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
PCDH7O60245 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDH7O60245 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.72■■□□□ 1.07
PCDH7O60245 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PCDH7O60245 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDH7O60245 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDH7O60245 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.71■■□□□ 1.07
PCDH7O60245 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.71■■□□□ 1.07
PCDH7O60245 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDH7O60245 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
PCDH7O60245 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDH7O60245 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.71■■□□□ 1.07
PCDH7O60245 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
PCDH7O60245 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PCDH7O60245 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDH7O60245 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.71■■□□□ 1.07
PCDH7O60245 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.71■■□□□ 1.07
PCDH7O60245 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
PCDH7O60245 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.7■■□□□ 1.07
PCDH7O60245 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDH7O60245 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
PCDH7O60245 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
PCDH7O60245 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
PCDH7O60245 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PCDH7O60245 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
PCDH7O60245 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.7■■□□□ 1.06
PCDH7O60245 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDH7O60245 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDH7O60245 ANOS2P-203ENST00000472227 1816 ntBASIC21.69■■□□□ 1.06
PCDH7O60245 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDH7O60245 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PCDH7O60245 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDH7O60245 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDH7O60245 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
PCDH7O60245 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.69■■□□□ 1.06
PCDH7O60245 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.69■■□□□ 1.06
PCDH7O60245 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PCDH7O60245 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDH7O60245 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDH7O60245 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDH7O60245 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.69■■□□□ 1.06
PCDH7O60245 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PCDH7O60245 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.68■■□□□ 1.06
PCDH7O60245 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.68■■□□□ 1.06
PCDH7O60245 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
PCDH7O60245 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.68■■□□□ 1.06
PCDH7O60245 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.68■■□□□ 1.06
PCDH7O60245 AC004448.1-201ENST00000458332 883 ntBASIC21.68■■□□□ 1.06
PCDH7O60245 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.68■■□□□ 1.06
PCDH7O60245 AL031848.2-201ENST00000607670 837 ntBASIC21.68■■□□□ 1.06
PCDH7O60245 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
PCDH7O60245 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PCDH7O60245 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.68■■□□□ 1.06
PCDH7O60245 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDH7O60245 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.67■■□□□ 1.06
PCDH7O60245 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDH7O60245 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.67■■□□□ 1.06
PCDH7O60245 AC068473.5-201ENST00000616428 2072 ntBASIC21.67■■□□□ 1.06
PCDH7O60245 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDH7O60245 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
PCDH7O60245 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDH7O60245 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms