Protein–RNA interactions for Protein: O14788

TNFSF11, Tumor necrosis factor ligand superfamily member 11, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11O14788 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.49■□□□□ 0.87
TNFSF11O14788 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
TNFSF11O14788 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TNFSF11O14788 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TNFSF11O14788 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
TNFSF11O14788 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
TNFSF11O14788 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.48■□□□□ 0.87
TNFSF11O14788 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TNFSF11O14788 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
TNFSF11O14788 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.47■□□□□ 0.87
TNFSF11O14788 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.47■□□□□ 0.87
TNFSF11O14788 AL356740.2-201ENST00000601559 647 ntBASIC20.47■□□□□ 0.87
TNFSF11O14788 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TNFSF11O14788 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TNFSF11O14788 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
TNFSF11O14788 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TNFSF11O14788 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TNFSF11O14788 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TNFSF11O14788 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TNFSF11O14788 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.46■□□□□ 0.87
TNFSF11O14788 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
TNFSF11O14788 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TNFSF11O14788 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
TNFSF11O14788 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
TNFSF11O14788 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.46■□□□□ 0.87
TNFSF11O14788 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.46■□□□□ 0.87
TNFSF11O14788 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.46■□□□□ 0.87
TNFSF11O14788 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.46■□□□□ 0.87
TNFSF11O14788 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TNFSF11O14788 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.46■□□□□ 0.87
TNFSF11O14788 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TNFSF11O14788 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TNFSF11O14788 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TNFSF11O14788 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TNFSF11O14788 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
TNFSF11O14788 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.45■□□□□ 0.86
TNFSF11O14788 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TNFSF11O14788 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.45■□□□□ 0.86
TNFSF11O14788 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
TNFSF11O14788 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.45■□□□□ 0.86
TNFSF11O14788 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.45■□□□□ 0.86
TNFSF11O14788 MIR3621-201ENST00000580529 85 ntBASIC20.45■□□□□ 0.86
TNFSF11O14788 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.45■□□□□ 0.86
TNFSF11O14788 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.44■□□□□ 0.86
TNFSF11O14788 ABCB10P4-201ENST00000566803 2184 ntBASIC20.44■□□□□ 0.86
TNFSF11O14788 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TNFSF11O14788 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TNFSF11O14788 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.44■□□□□ 0.86
TNFSF11O14788 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TNFSF11O14788 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TNFSF11O14788 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
TNFSF11O14788 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
TNFSF11O14788 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
TNFSF11O14788 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TNFSF11O14788 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TNFSF11O14788 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TNFSF11O14788 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.43■□□□□ 0.86
TNFSF11O14788 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.43■□□□□ 0.86
TNFSF11O14788 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.43■□□□□ 0.86
TNFSF11O14788 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.43■□□□□ 0.86
TNFSF11O14788 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.43■□□□□ 0.86
TNFSF11O14788 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TNFSF11O14788 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TNFSF11O14788 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TNFSF11O14788 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TNFSF11O14788 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TNFSF11O14788 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
TNFSF11O14788 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.42■□□□□ 0.86
TNFSF11O14788 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
TNFSF11O14788 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.42■□□□□ 0.86
TNFSF11O14788 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.42■□□□□ 0.86
TNFSF11O14788 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.42■□□□□ 0.86
TNFSF11O14788 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.42■□□□□ 0.86
TNFSF11O14788 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.42■□□□□ 0.86
TNFSF11O14788 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.42■□□□□ 0.86
TNFSF11O14788 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TNFSF11O14788 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TNFSF11O14788 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TNFSF11O14788 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.41■□□□□ 0.86
TNFSF11O14788 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TNFSF11O14788 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TNFSF11O14788 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
TNFSF11O14788 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
TNFSF11O14788 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TNFSF11O14788 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TNFSF11O14788 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TNFSF11O14788 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
TNFSF11O14788 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TNFSF11O14788 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TNFSF11O14788 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TNFSF11O14788 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
TNFSF11O14788 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TNFSF11O14788 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.4■□□□□ 0.86
TNFSF11O14788 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.4■□□□□ 0.86
TNFSF11O14788 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.4■□□□□ 0.86
TNFSF11O14788 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.4■□□□□ 0.86
TNFSF11O14788 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TNFSF11O14788 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.39■□□□□ 0.86
TNFSF11O14788 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
TNFSF11O14788 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms