Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CDX4O14627 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
CDX4O14627 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC22.31■■□□□ 1.16
CDX4O14627 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC22.31■■□□□ 1.16
CDX4O14627 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CDX4O14627 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
CDX4O14627 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC22.31■■□□□ 1.16
CDX4O14627 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CDX4O14627 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CDX4O14627 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC22.3■■□□□ 1.16
CDX4O14627 VGF-203ENST00000611537 1622 ntTSL 5 BASIC22.3■■□□□ 1.16
CDX4O14627 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
CDX4O14627 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CDX4O14627 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
CDX4O14627 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
CDX4O14627 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CDX4O14627 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CDX4O14627 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CDX4O14627 GXYLT1P2-201ENST00000433312 1230 ntBASIC22.29■■□□□ 1.16
CDX4O14627 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
CDX4O14627 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC22.29■■□□□ 1.16
CDX4O14627 AC142086.6-201ENST00000621154 1765 ntBASIC22.29■■□□□ 1.16
CDX4O14627 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
CDX4O14627 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CDX4O14627 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CDX4O14627 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC22.28■■□□□ 1.16
CDX4O14627 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
CDX4O14627 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
CDX4O14627 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC22.28■■□□□ 1.16
CDX4O14627 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CDX4O14627 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC22.28■■□□□ 1.16
CDX4O14627 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC22.28■■□□□ 1.16
CDX4O14627 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC22.28■■□□□ 1.16
CDX4O14627 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC22.28■■□□□ 1.16
CDX4O14627 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CDX4O14627 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CDX4O14627 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CDX4O14627 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC22.27■■□□□ 1.16
CDX4O14627 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CDX4O14627 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC22.27■■□□□ 1.16
CDX4O14627 CCDC92B-201ENST00000575506 885 ntBASIC22.27■■□□□ 1.16
CDX4O14627 NTF6G-201ENST00000591094 616 ntBASIC22.27■■□□□ 1.16
CDX4O14627 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC22.27■■□□□ 1.16
CDX4O14627 MIR6084-201ENST00000622012 110 ntBASIC22.27■■□□□ 1.16
CDX4O14627 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
CDX4O14627 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
CDX4O14627 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC22.27■■□□□ 1.16
CDX4O14627 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CDX4O14627 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.15
CDX4O14627 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC22.26■■□□□ 1.15
CDX4O14627 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CDX4O14627 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CDX4O14627 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
CDX4O14627 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC22.26■■□□□ 1.15
CDX4O14627 HLA-L-209ENST00000420110 1011 ntBASIC22.26■■□□□ 1.15
CDX4O14627 AICDA-202ENST00000537228 667 ntTSL 5 BASIC22.26■■□□□ 1.15
CDX4O14627 pRNA.6-201ENST00000610482 90 ntBASIC22.26■■□□□ 1.15
CDX4O14627 pRNA.5-201ENST00000612139 90 ntBASIC22.26■■□□□ 1.15
CDX4O14627 NKILA-201ENST00000613231 537 ntTSL 4 BASIC22.26■■□□□ 1.15
CDX4O14627 pRNA.11-201ENST00000618423 90 ntBASIC22.26■■□□□ 1.15
CDX4O14627 pRNA.13-201ENST00000619112 90 ntBASIC22.26■■□□□ 1.15
CDX4O14627 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC22.26■■□□□ 1.15
CDX4O14627 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC22.26■■□□□ 1.15
CDX4O14627 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CDX4O14627 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDX4O14627 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDX4O14627 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC22.25■■□□□ 1.15
CDX4O14627 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
CDX4O14627 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC22.25■■□□□ 1.15
CDX4O14627 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC22.25■■□□□ 1.15
CDX4O14627 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC22.25■■□□□ 1.15
CDX4O14627 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC22.25■■□□□ 1.15
CDX4O14627 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDX4O14627 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDX4O14627 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
CDX4O14627 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC22.24■■□□□ 1.15
CDX4O14627 AL022069.1-201ENST00000568025 1636 ntBASIC22.24■■□□□ 1.15
CDX4O14627 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC22.24■■□□□ 1.15
CDX4O14627 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC22.24■■□□□ 1.15
CDX4O14627 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
CDX4O14627 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC22.24■■□□□ 1.15
CDX4O14627 MIR572-201ENST00000384983 95 ntBASIC22.24■■□□□ 1.15
CDX4O14627 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC22.24■■□□□ 1.15
CDX4O14627 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
CDX4O14627 GTSE1-AS1-202ENST00000623117 1518 ntBASIC22.24■■□□□ 1.15
CDX4O14627 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CDX4O14627 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CDX4O14627 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC22.23■■□□□ 1.15
CDX4O14627 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
CDX4O14627 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CDX4O14627 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC22.23■■□□□ 1.15
CDX4O14627 AC012414.1-201ENST00000556676 535 ntBASIC22.23■■□□□ 1.15
CDX4O14627 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
CDX4O14627 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC22.23■■□□□ 1.15
CDX4O14627 AC010501.1-201ENST00000606270 1962 ntBASIC22.23■■□□□ 1.15
CDX4O14627 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CDX4O14627 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CDX4O14627 ME3-201ENST00000323418 1068 ntTSL 5 BASIC22.22■■□□□ 1.15
CDX4O14627 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC22.22■■□□□ 1.15
CDX4O14627 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC22.22■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms