Protein–RNA interactions for Protein: O00483

NDUFA4, Cytochrome c oxidase subunit NDUFA4, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4O00483 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
NDUFA4O00483 AC009299.2-201ENST00000482477 511 ntBASIC17.48■□□□□ 0.39
NDUFA4O00483 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NDUFA4O00483 AL451085.2-201ENST00000605085 799 ntBASIC17.48■□□□□ 0.39
NDUFA4O00483 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC17.48■□□□□ 0.39
NDUFA4O00483 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC17.48■□□□□ 0.39
NDUFA4O00483 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NDUFA4O00483 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
NDUFA4O00483 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NDUFA4O00483 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NDUFA4O00483 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
NDUFA4O00483 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC17.47■□□□□ 0.39
NDUFA4O00483 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC17.47■□□□□ 0.39
NDUFA4O00483 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC17.47■□□□□ 0.39
NDUFA4O00483 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC17.47■□□□□ 0.39
NDUFA4O00483 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
NDUFA4O00483 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC17.47■□□□□ 0.39
NDUFA4O00483 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
NDUFA4O00483 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NDUFA4O00483 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
NDUFA4O00483 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NDUFA4O00483 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
NDUFA4O00483 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
NDUFA4O00483 MIR6722-201ENST00000617286 78 ntBASIC17.46■□□□□ 0.39
NDUFA4O00483 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC17.46■□□□□ 0.39
NDUFA4O00483 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
NDUFA4O00483 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC17.46■□□□□ 0.39
NDUFA4O00483 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NDUFA4O00483 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NDUFA4O00483 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NDUFA4O00483 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NDUFA4O00483 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NDUFA4O00483 REST-206ENST00000612429 1376 ntTSL 5 BASIC17.45■□□□□ 0.38
NDUFA4O00483 REST-207ENST00000616975 1370 ntTSL 5 BASIC17.45■□□□□ 0.38
NDUFA4O00483 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NDUFA4O00483 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NDUFA4O00483 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NDUFA4O00483 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC17.45■□□□□ 0.38
NDUFA4O00483 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
NDUFA4O00483 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC17.45■□□□□ 0.38
NDUFA4O00483 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NDUFA4O00483 AC239859.2-201ENST00000444165 318 ntBASIC17.45■□□□□ 0.38
NDUFA4O00483 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC17.45■□□□□ 0.38
NDUFA4O00483 CLTA-210ENST00000540080 989 ntTSL 2 BASIC17.45■□□□□ 0.38
NDUFA4O00483 MIR4787-201ENST00000607364 84 ntBASIC17.45■□□□□ 0.38
NDUFA4O00483 AC092028.1-203ENST00000608262 953 ntBASIC17.45■□□□□ 0.38
NDUFA4O00483 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC17.45■□□□□ 0.38
NDUFA4O00483 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NDUFA4O00483 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC17.45■□□□□ 0.38
NDUFA4O00483 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NDUFA4O00483 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC17.45■□□□□ 0.38
NDUFA4O00483 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NDUFA4O00483 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC17.45■□□□□ 0.38
NDUFA4O00483 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC17.45■□□□□ 0.38
NDUFA4O00483 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC17.44■□□□□ 0.38
NDUFA4O00483 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC17.44■□□□□ 0.38
NDUFA4O00483 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NDUFA4O00483 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NDUFA4O00483 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
NDUFA4O00483 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NDUFA4O00483 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NDUFA4O00483 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NDUFA4O00483 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC17.44■□□□□ 0.38
NDUFA4O00483 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
NDUFA4O00483 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC17.44■□□□□ 0.38
NDUFA4O00483 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NDUFA4O00483 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NDUFA4O00483 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC17.44■□□□□ 0.38
NDUFA4O00483 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
NDUFA4O00483 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
NDUFA4O00483 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NDUFA4O00483 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NDUFA4O00483 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC17.43■□□□□ 0.38
NDUFA4O00483 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NDUFA4O00483 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NDUFA4O00483 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NDUFA4O00483 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
NDUFA4O00483 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
NDUFA4O00483 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
NDUFA4O00483 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
NDUFA4O00483 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NDUFA4O00483 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NDUFA4O00483 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NDUFA4O00483 RARA-203ENST00000394086 2008 ntTSL 2 BASIC17.42■□□□□ 0.38
NDUFA4O00483 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NDUFA4O00483 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
NDUFA4O00483 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
NDUFA4O00483 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NDUFA4O00483 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NDUFA4O00483 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NDUFA4O00483 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NDUFA4O00483 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NDUFA4O00483 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NDUFA4O00483 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NDUFA4O00483 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC17.41■□□□□ 0.38
NDUFA4O00483 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC17.41■□□□□ 0.38
NDUFA4O00483 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
NDUFA4O00483 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
NDUFA4O00483 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NDUFA4O00483 MTDHP2-201ENST00000601468 714 ntBASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms