Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
CLIC1O00299 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
CLIC1O00299 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CLIC1O00299 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.46■■□□□ 1.03
CLIC1O00299 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.46■■□□□ 1.03
CLIC1O00299 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLIC1O00299 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLIC1O00299 KRT18P60-201ENST00000312876 1297 ntBASIC21.46■■□□□ 1.03
CLIC1O00299 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLIC1O00299 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLIC1O00299 AC011551.1-201ENST00000614101 683 ntBASIC21.46■■□□□ 1.03
CLIC1O00299 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLIC1O00299 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
CLIC1O00299 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLIC1O00299 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CLIC1O00299 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
CLIC1O00299 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
CLIC1O00299 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CLIC1O00299 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
CLIC1O00299 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.45■■□□□ 1.02
CLIC1O00299 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CLIC1O00299 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CLIC1O00299 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CLIC1O00299 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.45■■□□□ 1.02
CLIC1O00299 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.44■■□□□ 1.02
CLIC1O00299 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLIC1O00299 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.44■■□□□ 1.02
CLIC1O00299 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CLIC1O00299 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLIC1O00299 HSD17B1P1-201ENST00000590052 955 ntBASIC21.44■■□□□ 1.02
CLIC1O00299 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CLIC1O00299 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
CLIC1O00299 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLIC1O00299 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CLIC1O00299 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLIC1O00299 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.43■■□□□ 1.02
CLIC1O00299 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.43■■□□□ 1.02
CLIC1O00299 AC131274.2-201ENST00000580697 1507 ntBASIC21.43■■□□□ 1.02
CLIC1O00299 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLIC1O00299 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CLIC1O00299 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CLIC1O00299 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CLIC1O00299 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CLIC1O00299 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
CLIC1O00299 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC21.42■■□□□ 1.02
CLIC1O00299 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CLIC1O00299 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.42■■□□□ 1.02
CLIC1O00299 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.42■■□□□ 1.02
CLIC1O00299 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
CLIC1O00299 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
CLIC1O00299 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
CLIC1O00299 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.41■■□□□ 1.02
CLIC1O00299 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CLIC1O00299 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CLIC1O00299 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CLIC1O00299 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.41■■□□□ 1.02
CLIC1O00299 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CLIC1O00299 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CLIC1O00299 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CLIC1O00299 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.41■■□□□ 1.02
CLIC1O00299 AC019171.1-201ENST00000601251 1056 ntBASIC21.41■■□□□ 1.02
CLIC1O00299 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.41■■□□□ 1.02
CLIC1O00299 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.41■■□□□ 1.02
CLIC1O00299 AL117328.2-201ENST00000624617 1940 ntBASIC21.41■■□□□ 1.02
CLIC1O00299 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CLIC1O00299 ALDH1A3-203ENST00000557963 1670 ntBASIC21.4■■□□□ 1.02
CLIC1O00299 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CLIC1O00299 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CLIC1O00299 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.4■■□□□ 1.02
CLIC1O00299 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
CLIC1O00299 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CLIC1O00299 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.4■■□□□ 1.02
CLIC1O00299 AC022616.5-201ENST00000518796 181 ntBASIC21.4■■□□□ 1.02
CLIC1O00299 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CLIC1O00299 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CLIC1O00299 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CLIC1O00299 AC233723.2-201ENST00000623798 2106 ntBASIC21.4■■□□□ 1.02
CLIC1O00299 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
CLIC1O00299 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CLIC1O00299 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.39■■□□□ 1.02
CLIC1O00299 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CLIC1O00299 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CLIC1O00299 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CLIC1O00299 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
CLIC1O00299 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
CLIC1O00299 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CLIC1O00299 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
CLIC1O00299 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
CLIC1O00299 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
CLIC1O00299 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CLIC1O00299 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CLIC1O00299 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.38■■□□□ 1.01
CLIC1O00299 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CLIC1O00299 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.38■■□□□ 1.01
CLIC1O00299 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.38■■□□□ 1.01
CLIC1O00299 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CLIC1O00299 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.38■■□□□ 1.01
CLIC1O00299 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
CLIC1O00299 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
CLIC1O00299 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms