Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 AC005703.6-201ENST00000623265 1329 ntBASIC20.72■□□□□ 0.91
NPIPA2E9PIF3 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NPIPA2E9PIF3 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NPIPA2E9PIF3 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NPIPA2E9PIF3 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.71■□□□□ 0.91
NPIPA2E9PIF3 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NPIPA2E9PIF3 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NPIPA2E9PIF3 HLA-L-211ENST00000482052 1765 ntBASIC20.71■□□□□ 0.91
NPIPA2E9PIF3 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NPIPA2E9PIF3 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
NPIPA2E9PIF3 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NPIPA2E9PIF3 AC131274.2-201ENST00000580697 1507 ntBASIC20.7■□□□□ 0.9
NPIPA2E9PIF3 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.7■□□□□ 0.9
NPIPA2E9PIF3 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.7■□□□□ 0.9
NPIPA2E9PIF3 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.7■□□□□ 0.9
NPIPA2E9PIF3 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NPIPA2E9PIF3 AC005837.3-201ENST00000612163 286 ntBASIC20.7■□□□□ 0.9
NPIPA2E9PIF3 AL139125.2-201ENST00000623134 1869 ntBASIC20.7■□□□□ 0.9
NPIPA2E9PIF3 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NPIPA2E9PIF3 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.7■□□□□ 0.9
NPIPA2E9PIF3 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.7■□□□□ 0.9
NPIPA2E9PIF3 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NPIPA2E9PIF3 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NPIPA2E9PIF3 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.69■□□□□ 0.9
NPIPA2E9PIF3 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.69■□□□□ 0.9
NPIPA2E9PIF3 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NPIPA2E9PIF3 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
NPIPA2E9PIF3 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.69■□□□□ 0.9
NPIPA2E9PIF3 SRD5A1P1-201ENST00000442297 786 ntBASIC20.69■□□□□ 0.9
NPIPA2E9PIF3 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NPIPA2E9PIF3 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.69■□□□□ 0.9
NPIPA2E9PIF3 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.69■□□□□ 0.9
NPIPA2E9PIF3 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NPIPA2E9PIF3 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NPIPA2E9PIF3 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.68■□□□□ 0.9
NPIPA2E9PIF3 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.68■□□□□ 0.9
NPIPA2E9PIF3 PBX2P1-201ENST00000493219 1291 ntBASIC20.68■□□□□ 0.9
NPIPA2E9PIF3 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.68■□□□□ 0.9
NPIPA2E9PIF3 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NPIPA2E9PIF3 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
NPIPA2E9PIF3 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NPIPA2E9PIF3 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
NPIPA2E9PIF3 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
NPIPA2E9PIF3 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.68■□□□□ 0.9
NPIPA2E9PIF3 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
NPIPA2E9PIF3 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NPIPA2E9PIF3 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NPIPA2E9PIF3 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
NPIPA2E9PIF3 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
NPIPA2E9PIF3 LINC01124-201ENST00000409786 2117 ntBASIC20.67■□□□□ 0.9
NPIPA2E9PIF3 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.67■□□□□ 0.9
NPIPA2E9PIF3 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
NPIPA2E9PIF3 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
NPIPA2E9PIF3 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NPIPA2E9PIF3 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.67■□□□□ 0.9
NPIPA2E9PIF3 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
NPIPA2E9PIF3 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NPIPA2E9PIF3 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NPIPA2E9PIF3 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NPIPA2E9PIF3 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.66■□□□□ 0.9
NPIPA2E9PIF3 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NPIPA2E9PIF3 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.66■□□□□ 0.9
NPIPA2E9PIF3 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
NPIPA2E9PIF3 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NPIPA2E9PIF3 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NPIPA2E9PIF3 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NPIPA2E9PIF3 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NPIPA2E9PIF3 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NPIPA2E9PIF3 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
NPIPA2E9PIF3 AL022069.1-201ENST00000568025 1636 ntBASIC20.65■□□□□ 0.9
NPIPA2E9PIF3 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NPIPA2E9PIF3 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NPIPA2E9PIF3 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
NPIPA2E9PIF3 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.65■□□□□ 0.9
NPIPA2E9PIF3 UNC93B3-201ENST00000308076 687 ntBASIC20.65■□□□□ 0.9
NPIPA2E9PIF3 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
NPIPA2E9PIF3 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NPIPA2E9PIF3 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.65■□□□□ 0.9
NPIPA2E9PIF3 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
NPIPA2E9PIF3 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.64■□□□□ 0.9
NPIPA2E9PIF3 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.64■□□□□ 0.9
NPIPA2E9PIF3 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
NPIPA2E9PIF3 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
NPIPA2E9PIF3 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NPIPA2E9PIF3 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NPIPA2E9PIF3 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
NPIPA2E9PIF3 AC135731.1-201ENST00000569415 2548 ntBASIC20.64■□□□□ 0.89
NPIPA2E9PIF3 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NPIPA2E9PIF3 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.63■□□□□ 0.89
NPIPA2E9PIF3 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.63■□□□□ 0.89
NPIPA2E9PIF3 AC133561.4-201ENST00000566112 224 ntBASIC20.63■□□□□ 0.89
NPIPA2E9PIF3 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
NPIPA2E9PIF3 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.63■□□□□ 0.89
NPIPA2E9PIF3 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.62■□□□□ 0.89
NPIPA2E9PIF3 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NPIPA2E9PIF3 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.62■□□□□ 0.89
NPIPA2E9PIF3 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NPIPA2E9PIF3 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NPIPA2E9PIF3 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.62■□□□□ 0.89
NPIPA2E9PIF3 AL136162.1-201ENST00000607711 1078 ntBASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms