Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 AC026202.3-201ENST00000600805 1127 ntBASIC19.41■□□□□ 0.7
TMEM235A6NFC5 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TMEM235A6NFC5 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
TMEM235A6NFC5 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
TMEM235A6NFC5 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TMEM235A6NFC5 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TMEM235A6NFC5 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TMEM235A6NFC5 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
TMEM235A6NFC5 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TMEM235A6NFC5 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TMEM235A6NFC5 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TMEM235A6NFC5 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
TMEM235A6NFC5 GUSBP5-202ENST00000510805 1989 ntBASIC19.39■□□□□ 0.7
TMEM235A6NFC5 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
TMEM235A6NFC5 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
TMEM235A6NFC5 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TMEM235A6NFC5 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
TMEM235A6NFC5 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TMEM235A6NFC5 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC19.39■□□□□ 0.69
TMEM235A6NFC5 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC19.39■□□□□ 0.69
TMEM235A6NFC5 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TMEM235A6NFC5 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.39■□□□□ 0.69
TMEM235A6NFC5 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TMEM235A6NFC5 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.39■□□□□ 0.69
TMEM235A6NFC5 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TMEM235A6NFC5 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TMEM235A6NFC5 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TMEM235A6NFC5 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TMEM235A6NFC5 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
TMEM235A6NFC5 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TMEM235A6NFC5 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TMEM235A6NFC5 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TMEM235A6NFC5 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TMEM235A6NFC5 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TMEM235A6NFC5 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TMEM235A6NFC5 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.38■□□□□ 0.69
TMEM235A6NFC5 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TMEM235A6NFC5 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.38■□□□□ 0.69
TMEM235A6NFC5 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TMEM235A6NFC5 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
TMEM235A6NFC5 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
TMEM235A6NFC5 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TMEM235A6NFC5 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.37■□□□□ 0.69
TMEM235A6NFC5 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TMEM235A6NFC5 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC19.37■□□□□ 0.69
TMEM235A6NFC5 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TMEM235A6NFC5 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.37■□□□□ 0.69
TMEM235A6NFC5 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
TMEM235A6NFC5 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.37■□□□□ 0.69
TMEM235A6NFC5 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.37■□□□□ 0.69
TMEM235A6NFC5 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.37■□□□□ 0.69
TMEM235A6NFC5 LINC00526-201ENST00000581067 1875 ntBASIC19.37■□□□□ 0.69
TMEM235A6NFC5 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
TMEM235A6NFC5 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.37■□□□□ 0.69
TMEM235A6NFC5 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TMEM235A6NFC5 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TMEM235A6NFC5 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TMEM235A6NFC5 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TMEM235A6NFC5 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TMEM235A6NFC5 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC19.36■□□□□ 0.69
TMEM235A6NFC5 CEP120-209ENST00000515110 606 ntTSL 3 BASIC19.36■□□□□ 0.69
TMEM235A6NFC5 SRP68-213ENST00000629930 165 ntTSL 5 BASIC19.36■□□□□ 0.69
TMEM235A6NFC5 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.36■□□□□ 0.69
TMEM235A6NFC5 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TMEM235A6NFC5 AC090877.2-201ENST00000558441 1738 ntBASIC19.36■□□□□ 0.69
TMEM235A6NFC5 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TMEM235A6NFC5 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TMEM235A6NFC5 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TMEM235A6NFC5 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TMEM235A6NFC5 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TMEM235A6NFC5 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.35■□□□□ 0.69
TMEM235A6NFC5 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TMEM235A6NFC5 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TMEM235A6NFC5 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.35■□□□□ 0.69
TMEM235A6NFC5 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
TMEM235A6NFC5 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TMEM235A6NFC5 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
TMEM235A6NFC5 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TMEM235A6NFC5 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TMEM235A6NFC5 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TMEM235A6NFC5 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
TMEM235A6NFC5 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.35■□□□□ 0.69
TMEM235A6NFC5 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.35■□□□□ 0.69
TMEM235A6NFC5 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TMEM235A6NFC5 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TMEM235A6NFC5 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TMEM235A6NFC5 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TMEM235A6NFC5 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
TMEM235A6NFC5 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
TMEM235A6NFC5 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
TMEM235A6NFC5 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.34■□□□□ 0.69
TMEM235A6NFC5 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
TMEM235A6NFC5 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TMEM235A6NFC5 AL161729.1-201ENST00000604104 1402 ntBASIC19.34■□□□□ 0.69
TMEM235A6NFC5 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TMEM235A6NFC5 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TMEM235A6NFC5 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
TMEM235A6NFC5 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TMEM235A6NFC5 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TMEM235A6NFC5 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms